snakemake threads wildcards not found...

split args of my script into multiple lines in snakemake...

Snakemake target rules may not contain wildcards...

Samtools shared library libcrypto.so.1.0.0 not found...

Snakemake wildcards from python wrapper not found...

Snakemake expand on a dictionary, keeping wildcards...

module 'asyncio' has no attribute 'coroutine' on snakemake...

Checkpoints, unknown files, intermediate processing - missing wildcards problem...

Snakemake - set final output filename from configuration...

Why does `snakemake --list-untracked ...` list the `config.yaml` file in its output?...

Generic input functions for Snakemake...

Running snakefile from directory that doesn't contain snakefile...

How to resolve wildcard error in Snakemake?...

Snakemake subtract a mask from two channels...

how to escape MissingOutputException while running a for loop in a rule in snakemake...

Empty pdf with for loop...

Bash code with if/else/fi and awk/perl regexps does work outside snakemake but not inside a snakemak...

What is the proper way to access values in nested dictionaries with Snakemake?...

Snakefile how to mix wildcards and variables...

Function or dict comprehension as a Snakefile output...

Target rules may not contain wildcards. Please specify concrete files or a rule without wildcards er...

How to make Snakemake wildcard work for empty string?...

Running multiple snakemake pipelines one after the other with one single script...

Snakemake expand zip some wildcards and expand full the other...

Run short python code directly on snakemake...

if element is in a list create a new list with named element + string with same elements in it...

How to pass a list or dictionary using Snakemake's command line config option...

Is it possible to see qsub job scripts and command line options etc. that will be issued by Snakemak...

Random "[Errno 13] Permission denied" during snakemake pipeline execution on cluster...

Snakemake : Failed to set marker file for job started ([WinError 3] The system cannot find the path ...