Snakemake : Failed to set marker file for job started ([WinError 3] The system cannot find the path ...

what is the snakemake variable name for slurm job id?...

Prevent snakemake from making output directory...

snakemake-workflows / rna-seq-star-deseq2: Could not create conda environment...

Can I define a default profile for snakemake?...

Snakemake/miniforge: Nothing provides libgcc-ng >=12 needed by freebayes-1.3.6-hbfe0e7f_2...

snakemake - do not delete output of failed rules...

Snakemake | Creating an aggregate without specifying a list in expand...

MissingOutputException snakemake...

How to use include directives with specific config files in snakemake?...

Snakemake: Only input files can be specified as functions...

Snakemake WorkflowError: Target rules may not contain wildcards...

Snakemake wildcards: Using wildcarded files from directory output...

Halt Snakemake rule while above rule finishes...

Snakemake pipeline not attempting to produce output?...

snakemake error: 'Wildcards' object has no attribute 'batch'...

Snakemake combine ambiguous rules...

R Draws Plots with Rectangles Instead of Text...

"scancel: error: Invalid job id Submitted batch job" with --cluster-cancel from snakemake...

Snakemake doesn't activate conda environment correctly...

'expand' won't do what I want. How do I generate a custom list of inputs to a rule in Sn...

Snakemake says list index is out of range even when sections of code are not accessed...

Parallel execution of a snakemake rule with same input and a range of values for a single parameter...

using lambda function to download files in snakemake: 'This IOFile is specified as a function an...

Snakemake job missing files, even though the only output has been completed...

Use wildcard to capture different datasets in Snakemake...

Snakemake workflow, ChildIOException or MissingInputException...

Snakemake with one input but multiple parameters permutations...

apply a snakemake rule on a list of values in parallel...

How to get the number of total scattergather items in Snakemake scatter/gather?...