fasta Examples and Free Source Code

cannot import name 'ESMForMaskedLM' from 'transformers' on Google colab...

python bioinformatics huggingface-transformers fasta

Merge every last two lines in a 3-line row together...

bioinformatics fasta

How to extract the last contig in a multifasta file using awk...

awk fasta

Trim first and last bases in fasta file...

awk bioinformatics trim fasta dna-sequence

Collapse a list of DNAstringsets into a single DNAStingset in order to apply writeXStringSet() and t...

r fasta dna-sequence

Trim FASTA sequences in R, before and after a certain pattern...

r fasta

How to read a list of gene pairs and write a fasta file for each line...

list bioinformatics biopython fasta

Printing a sequence from a fasta file...

bash grep fasta

csv_amino acid composition_columnwise...

sequence multiple-columns composition fasta

Create a new variable instance each time I split a string in Python...

python split bioinformatics fasta dna-sequence

Reverse complement SOME sequences in fasta file...

bash awk sed bioinformatics fasta

Replace single character in fasta header with awk or sed...

bash awk sed bioinformatics fasta

Output specific fields using bash...

bash fasta

convert multiple SEQ files to fasta format...

r sequence fasta

Remove a substring from lines starting with a specific character...

bash bioinformatics fasta

Using R::split() to separate data into groups according to names...

r split fasta

Remove multiple sequences from fasta file...

bash awk sed fasta

How to generate clusters based on multiples values of a data frame in R...

r filter fasta group blast

Finding matching motifs on sequence and their positions...

python position bioinformatics biopython fasta

Iterating through Pandas dataframe and dictionary items...

pandas dataframe numpy fasta gff

How to locate the position of non-missing sequence in the fasta...

fasta samtools

Count the number of occurrences of a char in each sequence in a fasta file with multiple sequences u...

linux bash grep fasta

Validate DNA FASTA sequence using Javascript and RegEx...

javascript regex fasta

Number of sequences in Fasta Text using Javascript...

javascript fasta

Reading in fasta file C++...

c++file bioinformatics fasta

Remove everything after and including a tab in FASTA header?...

sed bioinformatics fasta

Adding '|' to FASTA file headers in bash...

bash fasta

Extract text after last delimiter and attach at end of line [Linux/Ubuntu]...

linux bash sed fasta

Compare hg38 fasta to primate common ancestor fasta and get vcf...

bioinformatics fasta dna-sequence

Rearranging specific lines of text, based on a pattern...

bash unix fasta