Snakemake wrappers fails to open environment file: HTTP Error 404: Not Found...

Snakemake Checkpoint Throws (exited with non-zero exit code) even after correct completion...

Snakemake tabular configuration, expand, and merge - how to expand input files correctly?...

Working directory when using include in snakemake for rules that use the report() function...

Snakemake: functions as input not working as expected (InputFunctionException with KeyError)...

Snakemake ambiguity...

Using the expand() function in snakemake to perform a shell command multiple times...

snakemake: missing last rule by changing rull all command lines...

snakemake.remote.EGA: NameError: name 'self' is not defined...

Snakemake + docker example, how to use volumes...

Snakemake shell command should only take one file at a time, but it's trying to do multiple file...

snakemake running single jobs in parallel from all files in folder...

Snakemake always rebuilds targets, even when up to date...

Wildcard SyntaxError in Snakemake with no obvious cause...

Prevent scientific writing when creating a file through Snakemake...

ChildIOException when trying to make directories for workflow [Snakemake]...

Default memory request with possibility of override in a Snakefile?...

What is the practical difference between a sub-workflow and the includes directive? [Snakemake]...

Snakemake, pandas, and NCBI: how do I combine a pandas dataframe with the remote NCBI search?...

Snakemake: variable that defines whether process is submitted cluster job or the snakefile...

snakemake with prefix as output including a path...

Executing snakemake workflow without a Snakefile...

Snakemake - how do I input a range of different files delineated from each other numerically?...

Snakemake: validate nested yaml based on jsonschema...

Snakemake - How do I use each line of a file as an input?...

Is there a way to get a nice error report summary when running many jobs on DRMAA cluster?...

Snakemake producing wildly incoherent error when dryrunning...

Snakemake --forceall --dag results in mysterius Error: <stdin>: syntax error in line 1 near &#...

Single output file per group for grouped samples using Snakemake...

Bare bones necessary to run pipeline on snakemake?...