Wildcard within wildcard in Snakemake...
Read MoreAccessing snakemake variables in subscript...
Read MoreMultiple file type outputs from a single rule: Wildcards in input files cannot be determined from ou...
Read MoreHow to access snakemake.input[0]?...
Read Moresnakemake list rules to execute in cluster and local...
Read Morelambda function in snakemake output...
Read Moresnakemake: AmbiguousRuleException...
Read MoreSnakemake: expanding only a subset of wildcards...
Read MoreBest practice submitting SLURM jobs via Python...
Read MoreSnakemake problem: Merge all files together with space delimiter instead of iterating through it...
Read MoreHow to use Singularity in docker container?...
Read MoreSnakemake special symbol in wildcard...
Read MoreWorkflow always results in "Nothing to do" even when forcing rules...
Read Moresnakemake missing output exception after job completed...
Read MoreSnakemake doesn't read full file in R?...
Read MoreSnakemake Getting Checkpoint and Aggregate Function to Work...
Read Moreshell() function in run does not use singularity...
Read Moresnakemake interpreting full path as relative path...
Read MoreSnakemake InputFunctionException. AttributeError: 'Wildcards' object has no attribute...
Read MoreUse special symbols in Snakemake parameter section...
Read Moresubmitting a snakemake job to the cluster from within a ('correct') conda environment...
Read MoreSnakemake: 'Unexpected keyword notebook in rule definition' when trying to implement Jupyter...
Read MoreSnakemake - Missing MissingInputException in line 20: Missing input files for rule stringt:...
Read MoreSnakemake - delete all non-output files produced by a workflow...
Read Moresnakemake - replacing wildcards in input directive by anonymous function...
Read Morepassing dictionary of wildcard constraints from config file...
Read MoreUse local directory for wrapper in Snakemake rule...
Read MoreSnakemake SyntaxError: No rule keywords allowed after run/shell/script/wrapper/cwl in rule...
Read Moreconcatenation of ABRICATE csv results in snakemake file...
Read MoreCombination of inputs in the snakemake shell script...
Read More