fastq Examples and Free Source Code

Binning Together Allele Frequencies From VCF Sequencing Data...

bash awk vcf-vcard fastq sequencing

Extracting specific information from a Fastq file for Sequencing Analysis...

bash awk pattern-matching fastq sequencing

How can I make my Python script faster?...

python performance bioinformatics fastq

what's the meaning of samtools mpileup result "^F"...

bioinformatics fastq

Parse file and use some of the fields as variables using the header as name in bash...

bash sed while-loop separator fastq

Is glib command line parsing order-sensitive?...

c command-line-arguments glib fastq

Bash selecting files from directory listing stored in a string...

bash fastq

Incorporating multiple lists in one text file...

python python-3.x fastq

executing a command on pairedf iles and then renaming the outputs...

bash unix fastq

ValueError: invalid literal for int() with base 10: '' error occurs when part of larger code...

python python-2.7 fastq

Clean redundant files...

makefile fastq

python dictionary, make every odd number line to key and even number line to value from a file...

python dictionary fasta fastq

Parallel sed with group capture...

linux sed parallel-processing gnu-parallel fastq

Executing a command in a string in bash...

bash fastq

replace any line that starts with the symbol @ using sed, awk, cut...

bash awk sed cut fastq

.split() creating a blank line in python3...

python blank-line fastq

Specify input files in bash script...

bash user-input bioinformatics fastq

open3-error when trying to run a script using PBS::Client...

perl pbs qsub fastq

special outfile mysql with string inserted?...

mysql string text fastq

how to create an index to parse big text file...

python sqlite file indexing fastq

faster membership testing in python than set()...

python performance set fastq

How do I use parallel programming/multi threading in my bash script?...

multithreading bash parallel-processing fastq

Sed print between two matches, and replace with information...

regex bash sed fastq

Getting different output files...

bash output fastq

get content from variable whose name is taken from another variable...

bash variables eval fastq

Read list of files on unix and run command...

bash list loops unix fastq

Biopython -- reading a fixed number of seq_records at a time...

biopython fastq

assign file names dynamically to match directory name...

bash fastq

Peek into stream of Popen pipeline in Python...

python popen fastq

How to get a makefile to run all commands, regardless of targets or dependencies...

makefile bioinformatics fastq