I am trying to create a table with gtsummay package inside a function. I find problem with value of N not correct. Am not sure whether am missing something. I would like just to have the value of N after filtering. I have introduced missing values in the grade variable for demonstration purposes.
library(gtsummary)
library(dplyr)
trialmiss <- trial %>% mutate(grade = factor(ifelse(age<10, NA, as.character(grade))))
# My function
mytable <- function(variable){
trialmiss %>%
select(variable) %>%
filter(!is.na(variable)) %>%
tbl_summary()
}
mytable("grade")
# Desired Output
trialmiss %>%
filter(!is.na(grade)) %>%
select(grade) %>% tbl_summary()
You may use .data
pronoun.
mytable <- function(variable){
trialmiss %>%
select(variable) %>%
filter(!is.na(.data[[variable]])) %>%
tbl_summary()
}
mytable("grade")
You may also use include sym
(filter(!is.na(!!sym(variable)))
) Or get
for the same (filter(!is.na(get(variable)))
).