I am trying to create a choropleth with a color variable for the area, and a point variable that will vary in size depending on numerical value. The variables used here are not the final data but purely for illustration.
I have used the package absmapsdata to create the type of plot I want with ggplotly. However I am unable to make it work in Plotly. I would much prefer to use plotly.
I would like to put in place a color layer and a point layer with plotly using this mapping data (or any choropleth data with geometry feature).
Here is what I have tried so far:
With ggplotly
remotes::install_github("wfmackey/absmapsdata")
library(tidyverse)
library(sf)
library(absmapsdata)
library(plotly)
mapdata <- sa32016
glimpse(mapdata)
gives
Rows: 358
Columns: 12
$ sa3_code_2016 <chr> "10102", "10103", "10104", "10105", "10106", "10201", "1…
$ sa3_name_2016 <chr> "Queanbeyan", "Snowy Mountains", "South Coast", "Goulbur…
$ sa4_code_2016 <chr> "101", "101", "101", "101", "101", "102", "102", "103", …
$ sa4_name_2016 <chr> "Capital Region", "Capital Region", "Capital Region", "C…
$ gcc_code_2016 <chr> "1RNSW", "1RNSW", "1RNSW", "1RNSW", "1RNSW", "1GSYD", "1…
$ gcc_name_2016 <chr> "Rest of NSW", "Rest of NSW", "Rest of NSW", "Rest of NS…
$ state_code_2016 <chr> "1", "1", "1", "1", "1", "1", "1", "1", "1", "1", "1", "…
$ state_name_2016 <chr> "New South Wales", "New South Wales", "New South Wales",…
$ areasqkm_2016 <dbl> 6511.1906, 14283.4221, 9864.8680, 9099.9086, 12136.1738,…
$ cent_long <dbl> 149.6013, 148.9415, 149.8063, 149.6054, 148.6799, 151.21…
$ cent_lat <dbl> -35.44939, -36.43952, -36.49933, -34.51814, -34.58077, -…
$ geometry <MULTIPOLYGON [°]> MULTIPOLYGON (((149.979 -35..., MULTIPOLYGO…
The interactive map is plotted with ggplotly as follows:
fig1 <- mapdata %>%
filter(gcc_name_2016 == "Greater Melbourne") %>%
ggplot(aes(text = paste("Area:", sa3_name_2016, "<br>","Size:", areasqkm_2016))) +
geom_sf(aes(geometry = geometry))+
geom_point(aes(cent_long, cent_lat, size = areasqkm_2016))
fig1.plot <- ggplotly(fig1 , tooltip = "text")
fig1.plot
giving
I tried to put in a polygon layer and a point layer with plotly but have not had much luck
fig2.plot <- mapdata %>%
filter(gcc_name_2016 == "Greater Melbourne") %>%
plot_geo(split = ~sa3_name_2016, showlegend = FALSE, hoverinfo = "text",
text = ~paste("Area:", sa3_name_2016, "<br>","Size:", areasqkm_2016)) %>%
add_markers(x = ~cent_long, y = ~cent_lat, size = ~areasqkm_2016)%>%
layout(showlegend = FALSE)
fig2.plot
giving
When I drop the add_markers() layer it looks better but I get some strange warnings
fig2a.plot <- mapdata %>%
filter(gcc_name_2016 == "Greater Melbourne") %>%
plot_geo(split = ~sa3_name_2016, showlegend = FALSE, hoverinfo = "text",
text = ~paste("Area:", sa3_name_2016, "<br>","Size:", areasqkm_2016)) %>%
layout(showlegend = FALSE)
fig2a.plot
giving
And the following warning
Warning message:
The trace types 'scattermapbox' and 'scattergeo' require a projected coordinate system that is based on the WGS84 datum (EPSG:4326), but the crs provided is: '+proj=longlat +ellps=GRS80 +towgs84=0,0,0,0,0,0,0 +no_defs '. Attempting transformation to the target coordinate system.
Basically I want to use shapefiles to make figure 2a with centroid data for points, but without the strange lines and errors, with plotly
What @monkeyshines figured out worked for me. However I also wanted to add an "Open street maps" topographical layer. This worked for me.
# districts is a shapefile that has been read, and is an SF object
# facilities: a CSV with a latitude and longitude column
districts %>% plot_mapbox() %>% add_sf(
) %>% add_markers(
data=facilities,
y = ~latitude,
x = ~longitude
) %>% layout(
mapbox = list(
zoom = 4,
style = 'open-street-map'))