I am trying to run a script that has lots of comments to explain each table, statistical test and graph. I am using RStudio IDE as follows
source(filename, echo=T)
That ensures that the script outputs everything to the console. If I run the following sequence it will send all the output to a txt file and then switch off the output diversion
sink("filenameIwantforoutput.txt")
source(filename, echo=T)
sink()
Alas, I am finding that a lot of my comments are not being outputted. Instead I get
"...but only if we had had an exclusively b .... [TRUNCATED]".
Once before I learned where to preserve the output but that was a few months ago and now I cannot remember. Can you?
Set the max.deparse.length=
argument to source
. You probably need something greater than the default of 150. For example:
source(filename, echo=TRUE, max.deparse.length=1e3)
And note the last paragraph in the Details section of ?source
reads:
If ‘echo’ is true and a deparsed expression exceeds ‘max.deparse.length’, that many characters are output followed by ‘ .... [TRUNCATED] ’.