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snakemake

Include more than one snakefile

I would like to include more than one snakefile in the main Snakemake.

 prefixed = [filename for filename in os.listdir('.') if filename.startswith("Snakefile.")]
 include: ",".join(prefixed)

Unfortunately, this does not work.

Is there is build in method? Or any other way?

Solution

  • I found the way

    for f in prefixed:
    include: f