I'm using a library that comes with the usual AutoTools generated configure && make && make install
procedure. The library contains a main (shared) library and some tools and is mostly written in C.
Now I am running into a problem, where one of the builds of one of the tools fails when using an instrumenter (Score-P which wraps compiler calls to do its magic).
I narrowed it down to the following facts:
libMain uses C files and 1 C++ file, C files get compiler with gcc and C++ file with g++. The library gets linked with g++ as a shared lib.
binTool uses C files only but links against libMain.
This works without the instrumenter. However when used, it adds extra libs when linking with g++ that use C++ features. Linking binTool with gcc then gives undefined reference to 'operator delete[](void*)'
(and a few similar ones)
First: Could someone explain to me, why I have to be careful when linking against a shared library (use g++ even though the binary is only using C code)? I was under the impression, that linking of shared binaries is finalized so linking that should not pull in any new dependencies or that the dependencies are already resolved (in this case libMain
would know it needs libc++
and have it already referenced/stored/whatever-elf-is-doing)
Second: From reading the AutoTools docu I found that the linker for a program is chosen based on its source files. As libMain
uses a C++ file it is linked with g++. binTool
uses C files only hence it is linked with gcc. But binTool
links also libMain
which was C++-linked and seems to require to be linked with g++.
So where is the culprit? Is it AutoTools issuing the wrong linker command for binTool
? Or should g++ have done something different when linking libMain
?
For reference: gcc version 5.4.0 20160609 (Ubuntu 5.4.0-6ubuntu1~16.04.9)
ldd libMain
:
linux-vdso.so.1
librt.so.1
libpthread.so.0
libm.so.6 libc.so.6
libgcc_s.so.1
libdl.so.2
libnuma.so.1
libltdl.so.7
I found a solution (TL&DR jump down to the fat SOLUTION):
The situation was far more difficult than I thought. What happens is:
binTool
links to shared library libMain
which links to a shared library libExtraCxx
.
binTool
is a C program, hence linked with gcclibMain
contains a C++ file and is hence linked with g++. But it does not use any C++ library features so the linker omits libstdc++
from the libMain
link process.libExtraCxx
is a C library intended to be linked into C programs by means of an automatic wrapper script. As libMain
uses g++ it gets libExtraCxx
linked in. This library is supposed to intercept the C++ new
/delete
calls and does so by using the GNU -wrap
linker command and internally defines (manually) mangled versions of new
/delete
prefixed by __wrap_
and declares mangled versions of those prefixed by __real_
.Usually this works, because when a C++ linker would be used by binTool
the wrapper would issue the -wrap
commands and the libstdc++
provides the __real_
functions.
However the mistake is, that the libstdc++
does never get linked: libExtraCxx
is a C library that just hooks into C++ functions. libMain
does not use any C++ library functions and binTool
is again a C program and no shared library linked into it has libstdc++
linked into that.
So one could point to 2 problems:
libExtraCxx
should have been a C++ library and links libstdc++
but I guess this "tricks" are done to explicitly avoid the dependency on a C++ library so it can be used by the GNU, Intel or Clang C++ compiler which might have different standard libraries.libMain
should have libstdc++
not omitted. This can usually be done by passing -Wl,--no-as-needed
to the compiler/linker as explained here.I can't change libExtraCxx
due to the amount of work involved, but I can pass arguments to the compiler, so I went with 2.
However simply doing configure <...> LDFLAGS=-Wl,--no-as-needed
did not work. The flag was used but libstdc++
was not present.
I found the culprit to be libtool which is used by libMain
: libtool 2.4.2 does not pass the flag at the right position AFAIK this bug#12880 is not fixed yet, so I was searching for more.
SOLUTION
I found a hack here: Simply use CXX="$CXX -Wl,--no-as-needed"
. This basically makes libtool think, that the flag is part of the compiler command and it won't reorder it leaving it at the beginning.
For reference: I was using starPU so libMain
was actually libstarpu-1.2.so
. The failed binary (binTool
) is starpu_perfmodel_display
. The "fake"-C++-Library is from Score-P libscorep_adapter_memory_event_cxx.so.5
I just changed the names to simplify them.
For SCORE-P the solution is a bit more complicated as one cannot simply change CXX. So full solution to compile starPU with ScoreP is:
SCOREP_WRAPPER=off ~/Downloads/starpu-1.2.3/configure --prefix /usr/local CC=scorep-gcc CXX=scorep-g++ FC=scorep-gfortran --with-mpicc=scorep-mpicc --with-mpifort=scorep-mpif77
And
make SCOREP_WRAPPER_INSTRUMENTER_FLAGS="--opencl --thread=pthread" SCOREP_WRAPPER_COMPILER_FLAGS="-Wl,--no-as-needed"
Explanation: SCOREP_WRAPPER_COMPILER_FLAGS
will cause the wrapper to pass the flags to the compiler. As libTool is using the scorep wrapper it does not even see those flags so they get transparently added.