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rreshape2ffffbase

Reshape ffdf dataframe in R


I am using dcast function to rshape datframe in R, but while using large dataframe. I converted that into ffdf dataframe unable to use dcast function please help me if any alternatives. Find the below example i used for small dataframe and what i want to do for ffdf dataframe:

- hdsample <- read.csv("C:/Users/PK5016573/Desktop/hdsample.csv")
- View(hdsample)


hd<-dcast(hhpsample,MemberID~Year+Specialty+ProcedureGroup+Vendor+PlaceSvc+PCP+PrimaryConditionGroup+CharlsonIndex)

This is working but:

hhp<-read.ffdf("C:/Users/PK5016573/Desktop/hdsample.csv")

hd<-dcast(hhpsample,MemberID~Year+Specialty+ProcedureGroup+Vendor+PlaceSvc+PCP+PrimaryConditionGroup+CharlsonIndex)

This gives me error please help

thanks in advance pavan kancharala


Solution

  • I got answer for this question but it may not work largely factored data

    # Reshape_function to process on data
       # Reshaping data as per year and Primary condition group
        library(reshape2)
        library(ffbase)
        reshapefunction<-function(x){
        df=dcast(x,MemberID~ Year+PrimaryConditionGroup,
        value.var= "rep.x..each...2668990.",              
        fun.aggregate = sum)
        }
        # Reshaping data using reshape_function 
        # Specifying size of chunks to process the data
        PrimaryConditionGroup<-ffdfdply(x=hhp,split=hhp$MemberID
        ,FUN = function(x) reshapefunction(x),BATCHBYTES = 100000000,trace=TRUE)
    
    View(PrimaryConditionGroup)
    

    All the data was taken from kaggle competition added one more column "rep.x..each...2668990." which contains 1 in every row used for aggregation purpose