Extract specific word matching the pattern...

extract all rows of specific column after comparing two files...

A command line that works in a prompt and not in a script...

Conditionally process (bgzip, tabix) files using loop and if else statement...

Perl script cannot access Tabix folder...

Snakemake: rule for using many inputs for one output with multiple sub-groups...

How to convert the large bio-format file to database-like file that can be asynchronously accessed w...

makefile run execute one time for all rules...

How to match ID in column in unix?...

getopt not quite working, what am I doing wrong?...

Create a new dictionary with each iteration of loop...

Snakemake: unknown output/input files after splitting by chromosome...

Find matching key in two large sorted text files and compare values (VCF-files)...

construct DNA sequence based on variation and human reference...

Best way to run same rule twice with different params...

R extract part of string...

Indicating a population structure in EggLib Python...

Extracting lines of text depending on the len() of a particular column...

Extract the specific columns and strings from a file using linux or python...

Snakemake on gatk VariantRecalibrator...

How to find elements of a large (1 million elements) array in another larger array (600 million elem...

Deconstruct DNAstringsSets into normal strings...

Fixing segmentation fault error in bcftools...

Replace numeric genotype code with DNA letter...

How to open and read a .gz file in Nim (preferably line by line)...

Convert vcf to hap file, collapse genotypes...

How to save Variant Call Format (VCF) file to disk in R using VariantAnnotation Package...

pull string from a vcf file using awk...

change charters in a string based on vcf table data...

Using R for next-generation sequencing vcf files...