Access Profile Information in Snakemake Rule...

Snakemake: adapt the pipeline to the new version 8.18.1 (example of combining checkpoint use inside ...

How to run Snakemake >= 8 on a Slurm cluster?...

snakemake InputFunctionException in rule KeyError...

snakemake cluster script ImportError snakemake.utils...

snakemake: MissingOutputException in rule hifiasm in file /home/usr/path/to/Snakefile, line 13...

Snakemake: opening relative Github files in Snakemake modules OUTSIDE rules...

Snakemake Stripping Trailing Slash From Input...

What is the encoding of this SHA256 hash in the Snakemake documentation?...

Snakemake checkpoint is not evaluated...

Using Module in Snakemake. Define a rule after a use rule * from workflow throw an error...

If else for "temp" in snakemake...

Snakemake rule fails after doing only 1 job - Sortmerna...

Best practices for (bio)conda versions in Snakemake wrappers?...

Why won't snakemake re-run workflow if I touch the input file with size less than 100,000 bytes?...

How Do I Combine Parameters Conditionally?...

How to log time duration (for each job and total) for a snakemake workflow?...

Manage the wrappers in Snakemake...

Snakemake running as an AWS Batch or an AWS Fargate task raises MissingInputException on the inputs ...

Multiple variables in input and output using wildcards snakemake...

How to enable "output" to detect variables in "run" in snakemake...

How to debug scripts for PyPSA-EUR?...

config file taking it as literal string snakemake...

Best practices for integrating optional arguments in shell command inside a snakemake pipeline...

Is there a way I can use snakemake to generate files based on sequence in a list?...

Setting resources dynamically on snakemake...

Define input files for snakemake using glob...

fastq-dump.3.1.1 err: item not found while constructing within virtual database module - the path &#...

Snakemake how to move files created to a new directory of same name...

expand based on a dictionary...