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Cytoscape tutorial "RNA-Seq data network analysis" not (easily) reproducible...


cytoscaperna-seq

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Error loading paramSweep_v3 in DoubletFinder in R...


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Merging large TCGA .tsv files in a memory-efficient way on Posit Cloud (formerly RStudio)...


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Create new column based on mean of values that are found in specific rows in R...


rrna-seq

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edgeR: Error in optimize(commonCondLogLikDerDelta, interval = c(1e-04, 100/(100 + : invalid 'tol...


rrna-seq

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subsetting anndata on basis of louvain clusters...


pythonrna-seqscanpy

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for-loop linear regression generation new dataframe with the results...


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pythonpython-3.xrna-seqscanpy

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How to get Snakemake and CellRanger Count to work with multiple samples...


pythonsnakemakerna-seq

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How to get specific RNA sequence of Anndata?...


python-3.xrna-seqscanpy

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Gene names from vmatchPattern (Biostrings)...


rbioinformaticsrna-seq

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Please explain me why i am getting this error in snakemake? I´ve been strugling for days please...


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How to subset dataframe in R based on another data...


rrna-seq

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Gseapy: how to get gene list used for each pathway...


pandaslistbioinformaticsrna-seqscanpy

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WildcardError in Snakefile...


bioinformaticssnakemakerna-seq

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Error Pegasus package: TypeError: highly_variable_features() got an unexpected keyword argument &#39...


pythonrna-seq

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save as dataframe python...


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Missing input files after defining them in function...


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Is there a way to calculate the Z score for all values in a row in a data frame?...


rrna-seq

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Error in DESeqDataSet(se, design = design, ignoreRank) : counts matrix should be numeric, currently ...


rcountdatasetrna-seq

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snakemake - Missing input files for rule salmon_quant: error...


snakemakerna-seq

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Differential expression analysis - switch intercept coefficient...


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Seeing negative log2FC are upregulating in RNA-seq data...


rrna-seq

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Pull out genes/observations from cutree_rows groups in pheatmap...


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How to plot values by row in pheatmap?...


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