biplot, or plotting a partial RDA with ggplot2. what is not working with the arrows computed with va...

change genus string of specific taxa in phyloseq object...

How to add and specify additional ranks to phyloseq taxonomy?...

Rename values in a list based on a dataframe...

How to take random samples from a Phyloseq object...

Estimate_richness for all phyla in phyloseq...

How to remove very thin Bar Plot outline/border...

I can't get the coefficients of the taxa that contribute to the groups differences...

Trouble making an object in phyloseq...

Conflicts within function calls to variables in R...

sam_data gets transformed into NAs and numerical values when using merge_samples phyloseq...

tax_glom() or merge_samples() inhibits downstream calls for sam_table() categories...

Coloring Rarefaction curve lines by metadata (vegan package) (phyloseq package)...

Failing to get individual boxplot intervals for sample locations for phylosq object...

Trying to subset a large table using counts of all row values in a single column...

Converting existing data in R into Phyloseq OTU table...

error while writing file after adonis analysis...

Phylo tree has no branch lengths using phylosig () R...

Trying to change colour of one variable in ggplot geom_bar dependent on the string...

Coloring by variable for phyloseq boxplots...

How to turn my legend horizontal as opposed to vertical with ggplot2?...

How to color one specific taxa on a barplot while the rest are grey using a phyloseq object?...

Non standard evaluation does not work: Error in h(simpleError(msg, call))...

OTU table from phyloseq object can't be coerced into a data frame...

Get tree from ancestor nodes of cutree groups R...

Change size of label annotations in a ggplot...

Removing the original color outline in R when using a new pallette in a barplot...

How to display a dataframe with factors in R data viewer?...

Phyloseq, how obtain the relative Abundance by merge_samples?...

R phyloseq tax_glom used in a function give a error...