dna-sequence Examples and Free Source Code

Implementing Smith-Waterman algorithm for local alignment in python...

python algorithm dna-sequence sequence-alignment

Dictionary not working on DNA string from txt file...

python dictionary compiler-errors bioinformatics dna-sequence

Check if user input string contains only uppercase and/or lowercase letters...

javascript google-chrome google-chrome-extension dna-sequence

Fast Python Short DNA String Comparison...

python alignment dna-sequence

Find position of string (DNA sequence) on reference with mismatches ("N")...

python string bioinformatics biopython dna-sequence

Group a DNA sequence in codons...

r dna-sequence

Looking for a python function to find the longest sequentially repeated substring in a string...

python bioinformatics dna-sequence

Align many short sequences from two lists and find complementary...

r string dna-sequence

Picard SamToFastq only extracts one read, then throws an error...

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CS50 Problem Set 6 (DNA) "Python", I can't count Intermittent DNA sequence, my code su...

python python-3.x string cs50 dna-sequence

Generate all Permutations with at most d Mismatches...

python permutation bioinformatics dna-sequence

Parsing items in a list of lists, in groups of three, and extract a fragment between a reading frame...

python bioinformatics dna-sequence transcription

Pcregrep duplicating matching multi-line patterns?...

unix multiline dna-sequence pcregrep

Solution needed for identifying partially matching strings (DNA sequences) in a data.frame with many...

r sed dna-sequence

How to catch the longest sequence of a group...

python python-3.x regex cs50 dna-sequence

Read fasta file into a matrix or vector for MolecularEntropy function in R...

r sequence bioinformatics entropy dna-sequence

a query to generate 5 random DNA sequences that are each about 20 bases,...

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python and user defined functions...

python python-3.x data-science bioinformatics dna-sequence

Convert DNAStringSet to a list of elements in R? (Error in seq[[1]][["seq"]] : subscript o...

r bioconductor dna-sequence

How to do pairwise comparison of values in a single dictionary?...

python dictionary comparison fasta dna-sequence

Find longest palindrome substring of a piece of DNA...

python python-3.7 palindrome dna-sequence

How to count longest sequence of recurring characters in very long string inside text file in Python...

python regex cs50 dna-sequence

Determining if a sequence is a valid DNA sequence...

python if-statement python-3.x for-loop dna-sequence

Unexpected output in randomized motif search in DNA strings...

python search random bioinformatics dna-sequence

Test for the number of mutations in DNA strings...

algorithm difference levenshtein-distance dna-sequence

Computing edit distance of DNA sequence python...

python dynamic-programming bioinformatics dna-sequence

Need to count number of times sequence of letters occurs in string R...

string r search bioinformatics dna-sequence

Correlation between groups and ranks over different samples with R...

r correlation dna-sequence

Python regex module fuzzy match: substitution count not as expected...

python regex mismatch dna-sequence fuzzy-comparison

Concatenate multiple text files of DNA sequences in Python or R?...

python r concatenation dna-sequence