I have several phylogenetic trees imported into R
from Newick format. I am using the ape
package to plot the trees with plot.phylo
command. I would like to be able to change the font family (not only the size, which I can do with cex
, or color with col
) of the tip labels to monospace. The plot
command does take family
argument, but nothing happens when I pass family="mono"
. I tried including it in par
with no success either.
library(ape)
tr <- rtree(10)
plot(tr)
gives me the same as
plot(tr, family="mono")
And I would like to see a change in font.
EDIT: The font-family specification seems to work when saving graphic to png
, but not devSVG
. How can I save updated font to SVG
?
Finally, a success!
In order to be able to manipulate font-family when saving graphics in SVG
format, I had to use the package grDevices
and method cairo
:
library(cairo)
svg(filename = file, width = width, height = height, family = "mono")
which allows setting the family
argument.
For future reference, what did NOT work was:
devSVG(file, width, height)
and then setting family
in par
or plot
,
and
Cairo(file, width, height, type="svg")
with family
in par
or plot