I have an array x
of shape (N, T, d)
. I have two functions f
and g
which both take an array of shape (some_dimension, d)
and return an array of shape (some_dimension, )
.
I would like to compute f
on all of x
. This is simple: f(x.reshape(-1, d))
.
I would then like to compute g
only on the first slice of the second dimension, meaning g(x[:, 0, :])
and subtract this to the evaluation of f
on for all dimensions. This is exemplified in the code
import numpy as np
# Reproducibility
seed = 1234
rng = np.random.default_rng(seed=seed)
# Generate x
N = 100
T = 10
d = 2
x = rng.normal(loc=0.0, scale=1.0, size=(N, T, d))
# In practice the functions are not this simple
def f(x):
return x[:, 0] + x[:, 1]
def g(x):
return x[:, 0]**2 - x[:, 1]**2
# Compute f on all the (flattened) array
fx = f(x.reshape(-1, d)).reshape(N, T)
# Compute g only on the first slice of second dimension. Here are two ways of doing so
gx = np.tile(g(x[:, 0])[:, None], reps=(1, T))
gx = np.repeat(g(x[:, 0]), axis=0, repeats=T).reshape(N, T)
# Finally compute what I really want to compute
diff = fx - gx
Is there a more efficient way? I feel that using broadcasting there must be, but I cannot figure it out.
Reducing the size of the example so we can examine (5,4) arrays:
In [138]:
...: # Generate x
...: N = 5
...: T = 4
...: d = 2
...: x = np.arange(40).reshape(N,T,d) #(rng.normal(loc=0.0, scale=1.0, size=(N, T, d))
...:
...: # In practice the functions are not this simple
...: def f(x):
...: return x[:, 0] + x[:, 1]
...:
...: def g(x):
...: return x[:, 0]**2 - x[:, 1]**2
...:
...: # Compute f on all the (flattened) array
...: fx = f(x.reshape(-1, d)).reshape(N, T)
...:
...: # Compute g only on the first slice of second dimension. Here are two ways of doing so
...: gx1 = np.tile(g(x[:, 0])[:, None], reps=(1, T))
...: gx2 = np.repeat(g(x[:, 0]), axis=0, repeats=T).reshape(N, T)
In [139]: fx.shape,gx1.shape,gx2.shape
Out[139]: ((5, 4), (5, 4), (5, 4))
All the elements of fx
differ, so no further 'broadcasting' is possible.
In [140]: fx
Out[140]:
array([[ 1, 5, 9, 13],
[17, 21, 25, 29],
[33, 37, 41, 45],
[49, 53, 57, 61],
[65, 69, 73, 77]])
Your use of tile
and repeat
do the same thing. tile
uses repeat
, so doesn't add anything:
In [141]: gx1
Out[141]:
array([[ -1, -1, -1, -1],
[-17, -17, -17, -17],
[-33, -33, -33, -33],
[-49, -49, -49, -49],
[-65, -65, -65, -65]])
In [142]: gx2
Out[142]:
array([[ -1, -1, -1, -1],
[-17, -17, -17, -17],
[-33, -33, -33, -33],
[-49, -49, -49, -49],
[-65, -65, -65, -65]])
gx
just repeats the 5 g()
values 4 times.
In [143]: g(x[:, 0])
Out[143]: array([ -1, -17, -33, -49, -65])
In [144]: fx-gx1
Out[144]:
array([[ 2, 6, 10, 14],
[ 34, 38, 42, 46],
[ 66, 70, 74, 78],
[ 98, 102, 106, 110],
[130, 134, 138, 142]])
So gx
can be replaced with a (5,1) array, which broadcasts with the (5,4) fx
:
In [145]: fx-g(x[:,0])[:,None]
Out[145]:
array([[ 2, 6, 10, 14],
[ 34, 38, 42, 46],
[ 66, 70, 74, 78],
[ 98, 102, 106, 110],
[130, 134, 138, 142]])
I haven't tried to make more sense of the T
versus d
dimensions that I commented on.
This answer may be too wordy, but it illustrates the way I visualized and discovered a broadcasting
fix.