I am trying to create the summary below but while creating the summary the sub function roundval is giving the error for tabl1 else tabl2 is working fine.
I cant change the data , i have to deal with NA so what should i update in function perc_75 to get the output of tab1
library(expss)
dat <- data.frame(cc=c("AMB","CCU","DDI","GLL","MNA","KMB","LTI","DDI","GLL","MNA","CCU","AMB","KMB","LTI","DDI","CCU","GLL"),
duration=c(1,NA,66,NA,5,NA,3,1,NA,21,NA,25,NA,17,NA,NA,6),
duration2=c(1,4,66,5,5,11,3,1,6,21,54,25,12,17,9,8,6))
roundval <- function (x)
{
ifelse(round(abs(x - trunc(x)), 1) == 0.5, trunc(x + 0.5),
round(x))
}
perc_75 <- function(x) roundval(quantile(x,type = 6,probs = seq(0,1, 0.25),na.rm = TRUE))[4]
tabl1 <- cross_fun(
dat,
dat$duration,
col_vars = dat$cc,
fun = combine_functions(
`75th Perc` = perc_75,
`Valid N` = valid_n
)
)
tabl2 <- cross_fun(
dat,
dat$duration2,
col_vars = dat$cc,
fun = combine_functions(
`75th Perc` = perc_75,
`Valid N` = valid_n
)
)
below is the error i am getting
Error in [.data.table
(raw_data, , fun(.SD), by = by_string) :
Column 1 of result for group 2 is type 'integer' but expecting type 'double'. Column types must be consistent for each group.
You can change roundval
so it returns integer values:
roundval <- function (x)
{
ifelse(round(abs(x - trunc(x)), 1) == 0.5, as.integer(trunc(x + 0.5)),
as.integer(round(x)))
}