I can successfully open the application from the ~/Cytoscape_v3.10.0/cytoscape.sh script, but the clicking the icon in the applications list does absolutely nothing, and likewise right-clicking a '.cys' file to open with cytoscape (which appears in the app list) does nothing as well.
Any ideas how I can resolve this issue?
Known issue. Fixed in 3.10.1, which will be release soon.