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pythondata-sciencerunumap

TypeError: 'module' object is not callable - while using UMAP

import umap as UMAP

import umap


retarget = {df_train['target'].value_counts().reset_index()['index'][i]: i for i in range(len(df_train['target'].value_counts()))}
retarget2 = {i: k for k, i in retarget.items()}
df_train['target'] = df_train['target'].map(retarget)

umap = umap(n_components = 2, n_neighbors = 10, min_dist = 0.99).fit_transform(df_train.drop('target', axis = 1).sample(15000, random_state = 228), df_train['target'].sample(15000, random_state = 228))

I am trying to use UMAP for visualization but it is keep on giving me error:

TypeError                                 Traceback (most recent call last)
<ipython-input-15-bb51a04f463b> in <module>
      8 df_train['target'] = df_train['target'].map(retarget)
      9 
---> 10 umap = umap(n_components = 2, n_neighbors = 10, min_dist = 0.99).fit_transform(df_train.drop('target', axis = 1).sample(15000, random_state = 228), df_train['target'].sample(15000, random_state = 228))
     11 
     12 plt.figure(figsize=(15, 12))

TypeError: 'module' object is not callable

I have umap installed in my system:

(base) C:\Users\bakumari\Anaconda3\Lib\site-packages>pip install umap
Collecting umap
  Using cached umap-0.1.1-py3-none-any.whl
Installing collected packages: umap
Successfully installed umap-0.1.1

I am trying to use umap for visualization purpose.

Solution

  • You need to install umap-learn

    pip uninstall umap
pip install umap-learn

    and then

    import umap
umap = umap.UMAP(n_components = 2, n_neighbors = 10, min_dist = 0.99).fit_transform(df_train.drop('target', axis = 1).sample(15000, random_state = 228), df_train['target'].sample(15000, random_state = 228))