Here is a representation of my dataset:
Number<-c(1:10)
AA<-c(head(LETTERS,4), rep(NA,6))
BB<-c(head(letters,6), rep(NA,4))
CC<-c(1:6, rep(NA,4))
DD<-c(10:14, rep(NA,5))
EE<-c(3:8, rep(NA,4))
FF<-c(6:1, rep(NA,4))
mydata<-data.frame(Number,AA,BB,CC,DD,EE,FF)
I want to delete all the IDs (Number)
that have no information in the remaining columns, automatically. I want to tell the function that if there is a value in Number
but there is only NA
in all the remaining columns, delete the row.
I must have the dataframe below:
Number AA BB CC DD EE FF
1 1 A a 1 10 3 6
2 2 B b 2 11 4 5
3 3 C c 3 12 5 4
4 4 D d 4 13 6 3
5 5 <NA> e 5 14 7 2
6 6 <NA> f 6 NA 8 1
We can use if_all/if_all
library(dplyr)
mydata %>%
filter(if_any(-Number, complete.cases))
-output
Number AA BB CC DD EE FF
1 1 A a 1 10 3 6
2 2 B b 2 11 4 5
3 3 C c 3 12 5 4
4 4 D d 4 13 6 3
5 5 <NA> e 5 14 7 2
6 6 <NA> f 6 NA 8 1
or
mydata %>%
filter(!if_all(-Number, is.na))
Or with base R
subset(mydata, rowSums(!is.na(mydata[-1])) >0 )
Number AA BB CC DD EE FF
1 1 A a 1 10 3 6
2 2 B b 2 11 4 5
3 3 C c 3 12 5 4
4 4 D d 4 13 6 3
5 5 <NA> e 5 14 7 2
6 6 <NA> f 6 NA 8 1