I have this PySpark df
:
+---------+----+----+----+----+----+----+----+----+----+
|partition| 1| 2| 3| 4| 5| 6| 7| 8| 9|
+---------+----+----+----+----+----+----+----+----+----+
| 7|null|null|null|null|null|null| 0.7|null|null|
| 1| 0.2| 0.1| 0.3|null|null|null|null|null|null|
| 8|null|null|null|null|null|null|null| 0.8|null|
| 4|null|null|null| 0.4| 0.5| 0.6|null|null| 0.9|
+---------+----+----+----+----+----+----+----+----+----+
from which I have combined the 9 right columns:
+---------+--------------------+
|partition| vec_comb|
+---------+--------------------+
| 7| [,,,,,,,, 0.7]|
| 1|[,,,,,, 0.1, 0.2,...|
| 8| [,,,,,,,, 0.8]|
| 4|[,,,,, 0.4, 0.5, ...|
+---------+--------------------+
How can I remove the NullTypes
from the arrays of vec_comb
column?
Expected output:
+---------+--------------------+
|partition| vec_comb|
+---------+--------------------+
| 7| [0.7]|
| 1| [0.1, 0.2,0.3]|
| 8| [0.8]|
| 4|[0.4, 0.5, 0.6, 0,9]|
+---------+--------------------+
I've tried (obviously wrong, but I can't wrap my head around this):
def clean_vec(array):
new_Array = []
for element in array:
if type(element) == FloatType():
new_Array.append(element)
return new_Array
udf_clean_vec = F.udf(f=(lambda c: clean_vec(c)), returnType=ArrayType(FloatType()))
df = df.withColumn('vec_comb_cleaned', udf_clean_vec('vec_comb'))
You can use higher-order function filter
to remove null elements:
import pyspark.sql.functions as F
df2 = df.withColumn('vec_comb_cleaned', F.expr('filter(vec_comb, x -> x is not null)'))
df2.show()
+---------+--------------------+--------------------+
|partition| vec_comb| vec_comb_cleaned|
+---------+--------------------+--------------------+
| 7| [,,,,,, 0.7,,]| [0.7]|
| 1|[0.2, 0.1, 0.3,,,...| [0.2, 0.1, 0.3]|
| 8| [,,,,,,, 0.8,]| [0.8]|
| 4|[,,, 0.4, 0.5, 0....|[0.4, 0.5, 0.6, 0.9]|
+---------+--------------------+--------------------+
You can use a UDF, but it will be slower, e.g.
udf_clean_vec = F.udf(lambda x: [i for i in x if i is not None], 'array<float>')
df2 = df.withColumn('vec_comb_cleaned', udf_clean_vec('vec_comb'))