I have an Apache Beam application(using beam version 2.23.0) that I am trying to deploy on AWS EMR(emr-5.30.1) with Flink(1.10.0) preinstalled.
The application is running with no issues when I deploy it on my local docker flink cluster. But when I do
flink run -m yarn-cluster -c my_class my_jar.jar
on the master node of the EMR cluster
I get
java.util.ServiceConfigurationError: com.fasterxml.jackson.databind.Module: Provider com.fasterxml.jackson.module.jaxb.JaxbAnnotationModule not a subtype
at java.util.ServiceLoader.fail(ServiceLoader.java:239)
at java.util.ServiceLoader.access$300(ServiceLoader.java:185)
at java.util.ServiceLoader$LazyIterator.nextService(ServiceLoader.java:376)
at java.util.ServiceLoader$LazyIterator.next(ServiceLoader.java:404)
at java.util.ServiceLoader$1.next(ServiceLoader.java:480)
at com.fasterxml.jackson.databind.ObjectMapper.findModules(ObjectMapper.java:1054)
at org.apache.beam.sdk.options.PipelineOptionsFactory.<clinit>(PipelineOptionsFactory.java:471)
at org.myapp.main(MainApp.java:78)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.flink.client.program.PackagedProgram.callMainMethod(PackagedProgram.java:321)
at org.apache.flink.client.program.PackagedProgram.invokeInteractiveModeForExecution(PackagedProgram.java:205)
at org.apache.flink.client.ClientUtils.executeProgram(ClientUtils.java:138)
at org.apache.flink.client.cli.CliFrontend.executeProgram(CliFrontend.java:664)
at org.apache.flink.client.cli.CliFrontend.run(CliFrontend.java:213)
at org.apache.flink.client.cli.CliFrontend.parseParameters(CliFrontend.java:895)
at org.apache.flink.client.cli.CliFrontend.lambda$main$10(CliFrontend.java:968)
at java.security.AccessController.doPrivileged(Native Method)
at javax.security.auth.Subject.doAs(Subject.java:422)
at org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1844)
at org.apache.flink.runtime.security.HadoopSecurityContext.runSecured(HadoopSecurityContext.java:41)
at org.apache.flink.client.cli.CliFrontend.main(CliFrontend.java:968)
Seems like the issue is with
org.apache.beam.sdk.options.PipelineOptionsFactory.<clinit>(PipelineOptionsFactory.java:471) but I am not clear on what is causing this behaviour.
Can someone please advise what may cause this?
Thank you in advance!
That is probably a classloading issue.
On EMR Flink EC2 instance, there are already some jars, and these libraries are loaded before your own dependencies. So, the version that is used at runtime is the one provided by EMR, not the one you have as a dependency in your own pom.xml.
There are multiple solutions:
pom.xml, use the same version than the one provided by EMR