I'm looking to conditionally rowSums if those rows represent <1% of the data - and then replace the original values with the rowSums. *Bonus if the table could include the number of rows that were summed into the name column (e.g., "Other(n=2)"). This is a small part of a much larger function. See example below:
Example data:
name | Year1 | Year2 | Year3 | Total | Percent |
---|---|---|---|---|---|
John | 1 | 2 | 1 | 4 | 0.7029877 |
Paul | 230 | 100 | 150 | 480 | 84.358524 |
George | 41 | 30 | 10 | 81 | 14.235501 |
Ringo | 2 | 1 | 1 | 4 | 0.7029877 |
# Code for example data
name <- c("John", "Paul", "George", "Ringo")
Year1 <- c(1, 230, 41, 2)
Year2 <- c(2, 100, 30, 1)
Year3 <- c(1, 150, 10, 1)
df <- data.frame(name, Year1, Year2, Year3)
df$Total <- rowSums(select(df,Year1:Year3))
df$Percent <- df$Total/sum(df$Total)*100
In the solution, John and Ringo would be combined into one 'Other' solution since both have Percent < 1.
# Code for example solution
name <- c("Paul", "George", "Other(n=2)")
Year1 <- c(230, 41, 3)
Year2 <- c(100, 30, 3)
Year3 <- c(150, 10, 2)
df2 <- data.frame(name, Year1, Year2, Year3)
df2$Total <- rowSums(select(df2,Year1:Year3))
df2$Percent <- df2$Total/sum(df2$Total)*100
Example solution:
name | Year1 | Year2 | Year3 | Total | Percent |
---|---|---|---|---|---|
Paul | 230 | 100 | 150 | 480 | 84.358524 |
George | 41 | 30 | 10 | 81 | 14.235501 |
Other(n=2) | 3 | 3 | 2 | 8 | 1.405975 |
library(tidyverse) # or use forcats::fct_lump(...
df %>%
mutate(name_lumped = fct_lump(name, w = Percent, prop = 0.01)) %>%
group_by(name_lumped) %>%
summarize(across(Year1:Percent, sum))
# A tibble: 3 x 6
name_lumped Year1 Year2 Year3 Total Percent
<fct> <dbl> <dbl> <dbl> <dbl> <dbl>
1 George 41 30 10 81 14.2
2 Paul 230 100 150 480 84.4
3 Other 3 3 2 8 1.41