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python-3.xtensorflowlstm

ValueError: Shapes (None, 1) and (None, 90) are incompatible

I want to build a deep RNN where my x_train and my y_train. When I execute the code below:

print(X_train_fea.shape, y_train_fea.shape)
X_train_res = np.reshape(X_train_fea,(10510,10,1))
y_train_res = np.reshape(y_train_fea.to_numpy(),(-1,1))
print(X_train_res.shape, y_train_res.shape)

result:

(10510, 10) (10510,)
(10510, 10, 1) (10510, 1)

and

model = Sequential([
    LSTM(90, input_shape=(10,1)), 
])
model.compile(optimizer='adam', loss='categorical_crossentropy', metrics=['accuracy'])
model.summary()

Model summary

When I fit the model

history = model.fit(X_train_res, y_train_res,epochs=5)

I got

ValueError: Shapes (None, 1) and (None, 90) are incompatible
Solution

  • Looks like y_train_res comprise of integer indices not one-hot vectors. If so you have to use sparse_categorical_crossentropy:

    model.compile(optimizer='adam', loss='sparse_categorical_crossentropy')

    and change its shape to 1D:

    y_train_res = np.reshape(y_train_fea.to_numpy(),(-1,))