I've checked and even though I found similar questions mine is different as I'm using a variable key.
My data is as follows:
{
"_id": "p9AXNCtfX5AWT5jRw",
"chr": "1",
"cousins": [
"B1KLeIiQE",
"H195r77hQ4",
"rkFnSX7n74",
"H8P6QcQXX"
],
"end": {
"B1KLeIiQE": 26384690,
"H195r77hQ4": 25029488,
"rkFnSX7n74": 26384690,
"H8P6QcQXX": 25224010
},
"numCousins": 4,
"start": {
"B1KLeIiQE": 18683049,
"H195r77hQ4": 18643577,
"rkFnSX7n74": 18650794,
"H8P6QcQXX": 18643577
}
}
It's easy to access the 2 corresponding key:value objects start and end in JS via gDoc.start[kitUser]
where kitUser will be any of the 4 strings present in the cousins array above.
So eg querying for the above document via the terminal would be:
db.groups.find({
cousins: "B1KLeIiQE",
chr: "1",
"start.B1KLeIiQE": {
$lte: 35000000
},
"end.B1KLeIiQE": {
$gte: 1
}
})
and I'd then convert the respective key 'B1KLeIiQE' to the value of 18683049 for start and 26384690 for end.
However I can't get the above query to work in Javascript as I can't resolve the field to query in a flexible way (meaning to include whichever value the key has to generate the 'start.B1KLeIiQE' and also 'end.B1KLeIiQE').
My current (failing) code looks like this):
const chr = '1';
const start = 1;
const end = 35000000;
const groupsArray = Groups.find({ chr, 'start.kitUser': { $lte: end },
'end.kitUser': { $gte: start }, cousins: kitUser }).fetch();
I also can't create an index on these 2 key:value objects (as there is a limit 1024 bytes per index and I have 1 document that goes has 1853 bytes) but I do have a compound index on cousins and chr which narrows the results before the filter is applied.
I do like the simple structure of the 2 key:value objects but I'm open for suggestions to change that format so that I can run the query in Javascript (Meteor).
You have syntax error in your code, try this:
const chr = '1';
const start = 1;
const end = 35000000;
const kitUser = 'B1KLeIiQE';
const query = {};
query['chr'] = chr;
query['start.' + kitUser] = { '$lte': end };
query['end.' + kitUser] = { '$gte: start };
query['cousins'] = kitUser;
const groupsArray = Groups.find(query).fetch();