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fortranmexintel-mkl

Matlab crashes when invoking functions from intel MKL


I'm trying to link Fortran code with Matlab using the Mex function. I can successfully compile and link the code using the following instruction:

mex COMPFLAGS="$COMPFLAGS -Qopenmp -Qmkl"...
'-IC:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\mkl\include'...
'-LC:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\mkl\lib\intel64'...
-lmkl_intel_ilp64.lib -lmkl_intel_thread.lib -lmkl_core.lib libiomp5md.lib...
ero_dep_fortran.F Module.F prepare_bank_collapse.F LINEAR_ELASTIC_STIFFNESS.F FAILURE_CRITERION.F OUTPUT.F pardisonew.F

However, when I execute the generated .mexw64 function, Matlab crashes without any error information. Then I debug my Fortran code line by line, and I found that Matlab crashes when invoking the function pardiso which comes from Intel MKL library. It seems that when invoking function from MKL, Matlab will crash and I have no idea how to fix it. Any suggestions will be appreciated.

PS: Thanks for the help from @Evg. Finally, the following instruction works:

mex COMPFLAGS="$COMPFLAGS -Qopenmp"...
'-IC:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\mkl\include'...
'-LC:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\mkl\lib\intel64'...
-lmkl_intel_ilp64.lib -lmkl_intel_thread.lib -lmkl_core.lib libiomp5md.lib...
ero_dep_fortran.F Module.F prepare_bank_collapse.F LINEAR_ELASTIC_STIFFNESS.F FAILURE_CRITERION.F OUTPUT.F pardisonew.F

Previous Additions: I also try to run the code on the Intel Parallel Studio XE 2017 compiler using makefile as:

ifort Module.F OUTPUT.F FAILURE_CRITERION.F pardisonew.F LINEAR_ELASTIC_STIFFNESS.F prepare_bank_collapse.F ero_dep_fortran.F /Qopenmp /Qmkl /nostandard-realloc-lhs /MD -o BANK_COLLAPSE.exe

The generated .exe works. So the problem is not due to the code self or the function pardiso from Intel MKL library. I guess there is something wrong when Matlab invokes pardiso, although it 'seems' to link sucessfully.

I use Matlab 2019b and Intel Parallel Studio XE 2017 for Fortran with Microsoft Visual Studio 2015 to compile and link the code.

The full output after compiling mex with -voption is

Verbose mode is on.
... Looking for compiler 'Intel Parallel Studio XE 2017 for Fortran with Microsoft Visual Studio 2015' ...
... Looking for environment variable 'IFORT_COMPILER17' ...Yes ('C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\').
... Looking for file 'C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\Bin\intel64\ifort.exe' ...Yes.
... Looking for folder 'C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows' ...Yes.
... Looking for registry setting 'HKLM\SOFTWARE\Microsoft\VisualStudio\SxS\VS7' 14.0 ...No.
... Looking for registry setting 'HKCU\SOFTWARE\Microsoft\VisualStudio\SxS\VS7' 14.0 ...No.
... Looking for registry setting 'HKLM\SOFTWARE\Wow6432Node\Microsoft\VisualStudio\SxS\VS7' 14.0 ...Yes ('C:\Program Files (x86)\Microsoft Visual Studio 14.0\').
... Looking for file 'C:\Program Files (x86)\Microsoft Visual Studio 14.0\VC\bin\amd64\cl.exe' ...Yes.
... Looking for folder 'C:\Program Files (x86)\Microsoft Visual Studio 14.0\VC' ...Yes.
... Looking for registry setting 'HKLM\SOFTWARE\Microsoft\Microsoft SDKs\Windows\v8.1' InstallationFolder ...No.
... Looking for registry setting 'HKCU\SOFTWARE\Microsoft\Microsoft SDKs\Windows\v8.1' InstallationFolder ...No.
... Looking for registry setting 'HKLM\SOFTWARE\Wow6432Node\Microsoft\Microsoft SDKs\Windows\v8.1' InstallationFolder ...Yes ('C:\Program Files (x86)\Windows Kits\8.1\').
... Looking for registry setting 'HKLM\SOFTWARE\Microsoft\Windows Kits\Installed Roots' KitsRoot10 ...Yes ('C:\Program Files (x86)\Windows Kits\10\').
Found installed compiler 'Intel Parallel Studio XE 2017 for Fortran with Microsoft Visual Studio 2015'.
Set PATH = C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\bin\intel64;C:\Program Files (x86)\Microsoft Visual Studio 14.0\VC\bin\amd64;C:\Program Files (x86)\Microsoft Visual Studio 14.0\VC\bin\VCPackages;C:\Program Files (x86)\Microsoft Visual Studio 14.0\VC\..\Common7\IDE;C:\Program Files (x86)\Microsoft Visual Studio 14.0\VC\..\Common7\Tools;C:\Program Files (x86)\Windows Kits\8.1\\bin\x64;C:\Program Files (x86)\Windows Kits\8.1\\Bin\x86;;C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\mpi\intel64\bin;C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.4.210\windows\mpi\intel64\bin;C:\Program Files (x86)\Common Files\Intel\Shared Libraries\redist\intel64_win\mpirt;C:\Program Files (x86)\Common Files\Intel\Shared Libraries\redist\ia32_win\mpirt;C:\Program Files (x86)\Common Files\Intel\Shared Libraries\redist\intel64_win\compiler;C:\Program Files (x86)\Common Files\Intel\Shared Libraries\redist\ia32_win\compiler;C:\Program Files (x86)\Intel\Intel(R) Management Engine Components\iCLS\;C:\Program Files\Intel\Intel(R) Management Engine Components\iCLS\;C:\Windows\system32;C:\Windows;C:\Windows\System32\Wbem;C:\Windows\System32\WindowsPowerShell\v1.0\;C:\Windows\System32\OpenSSH\;C:\Program Files (x86)\Intel\Intel(R) Management Engine Components\DAL;C:\Program Files\Intel\Intel(R) Management Engine Components\DAL;C:\Program Files (x86)\NVIDIA Corporation\PhysX\Common;C:\Program Files\Intel\WiFi;C:\Users\zk1357\AppData\Local\Microsoft\WindowsApps;C:\Users\zk1357\AppData\Roaming\npm;C:\Delft3D\w32\lib;C:\PROGRA~1\Deltares\w32\lib;C:\Program Files\TortoiseSVN\bin;C:\Program Files\MATLAB\MATLAB Compiler Runtime\v82\runtime\win64;"C:\WINDOWS\system32;C:\WINDOWS;C:\WINDOWS\System32\Wbem;C:\Windows\SysWOW64";C:\Program Files\Intel\WiFi\bin\;C:\Program Files\Common Files\Intel\WirelessCommon\;C:\WINDOWS\system32;C:\WINDOWS\System32\WindowsPowerShell\v1.0\;C:\WINDOWS\System32\OpenSSH\;C:\Program Files\Polyspace\R2019b\runtime\win64;C:\Program Files\Polyspace\R2019b\bin;C:\Program Files\Polyspace\R2019b\polyspace\bin;C:\Users\zk1357\AppData\Local\Microsoft\WindowsApps;C:\Users\zk1357\AppData\Roaming\npm;"C:\WINDOWS\system32;C:\WINDOWS;C:\WINDOWS\System32\Wbem";C:\Program Files (x86)\IntelSWTools\parallel_studio_xe_2017.5.060\compilers_and_libraries_2017\windows\bin\intel64;C:\Users\zk1357\iRIC\guis\prepost;
Set INCLUDE = C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\include;C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\compiler\include;C:\Program Files (x86)\Microsoft Visual Studio 14.0\VC\INCLUDE;C:\Program Files (x86)\Microsoft Visual Studio 14.0\VC\ATLMFC\INCLUDE;C:\Program Files (x86)\Windows Kits\10\\include\10.0.10150.0\ucrt;C:\Program Files (x86)\Windows Kits\8.1\\include\shared;C:\Program Files (x86)\Windows Kits\8.1\\include\um;C:\Program Files (x86)\Windows Kits\8.1\\include\winrt;C:\Program Files\Polyspace\R2019b\extern\include;;C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\include;C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\compiler\include;C:\Program Files (x86)\Microsoft Visual Studio 14.0\VC\INCLUDE;C:\Program Files (x86)\Microsoft Visual Studio 14.0\VC\ATLMFC\INCLUDE;C:\Program Files (x86)\Windows Kits\10\\include\10.0.10150.0\ucrt;C:\Program Files (x86)\Windows Kits\8.1\\include\shared;C:\Program Files (x86)\Windows Kits\8.1\\include\um;C:\Program Files (x86)\Windows Kits\8.1\\include\winrt;C:\Program Files\Polyspace\R2019b\extern\include;;
Set LIB = C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\lib\intel64;C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\compiler\lib\intel64;C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\compiler\lib\intel64_win;C:\Program Files (x86)\Microsoft Visual Studio 14.0\VC\Lib\amd64;C:\Program Files (x86)\Microsoft Visual Studio 14.0\VC\ATLMFC\Lib\amd64;C:\Program Files (x86)\Windows Kits\10\\Lib\10.0.10150.0\ucrt\x64;C:\Program Files (x86)\Windows Kits\8.1\\lib\winv6.3\um\x64;C:\Program Files\Polyspace\R2019b\lib\win64;C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\lib\intel64;C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\compiler\lib\intel64;C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\compiler\lib\intel64_win;C:\Program Files (x86)\Microsoft Visual Studio 14.0\VC\Lib\amd64;C:\Program Files (x86)\Microsoft Visual Studio 14.0\VC\ATLMFC\Lib\amd64;C:\Program Files (x86)\Windows Kits\10\\Lib\10.0.10150.0\ucrt\x64;C:\Program Files (x86)\Windows Kits\8.1\\lib\winv6.3\um\x64;C:\Program Files\Polyspace\R2019b\lib\win64;
Set LIBPATH = C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\compiler\Lib\Intel64;C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\compiler\lib\intel64_win;C:\Program Files (x86)\Windows Kits\8.1\\LIB\x64;C:\Program Files (x86)\Microsoft Visual Studio 14.0\VC\LIB\amd64;C:\Program Files (x86)\Microsoft Visual Studio 14.0\VC\ATLMFC\LIB\amd64;C:\Program Files\Polyspace\R2019b\extern\lib\win64;;C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\compiler\Lib\Intel64;C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\compiler\lib\intel64_win;C:\Program Files (x86)\Windows Kits\8.1\\LIB\x64;C:\Program Files (x86)\Microsoft Visual Studio 14.0\VC\LIB\amd64;C:\Program Files (x86)\Microsoft Visual Studio 14.0\VC\ATLMFC\LIB\amd64;C:\Program Files\Polyspace\R2019b\extern\lib\win64;;
Options file details
-------------------------------------------------------------------
    Compiler location: C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows
    Options file: C:\Users\zk1357\AppData\Roaming\MathWorks\MATLAB\R2019b\mex_FORTRAN_win64.xml
    CMDLINE200 : link  /nologo /manifest /INCREMENTAL:NO /DLL   /EXPORT:MEXFUNCTION /EXPORT:MEXFILEREQUIREDAPIVERSION C:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\ero_dep_fortran.obj C:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\Module.obj C:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\prepare_bank_collapse.obj C:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\LINEAR_ELASTIC_STIFFNESS.obj C:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\FAILURE_CRITERION.obj C:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\OUTPUT.obj C:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\pardisonew.obj C:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\fortran_mexapi_version.obj  "/LIBPATH:C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\mkl\lib\intel64"   /LIBPATH:"C:\Program Files\Polyspace\R2019b\extern\lib\win64\microsoft" libmx.lib libmex.lib libmat.lib  kernel32.lib user32.lib gdi32.lib winspool.lib comdlg32.lib advapi32.lib shell32.lib  ole32.lib oleaut32.lib uuid.lib odbc32.lib odbccp32.lib /out:ero_dep_fortran.mexw64
    CMDLINE250 : mt -outputresource:ero_dep_fortran.mexw64;2 -manifest "ero_dep_fortran.mexw64.manifest"
    CMDLINE300 : del "ero_dep_fortran.exp" "ero_dep_fortran.lib" "ero_dep_fortran.mexw64.manifest" "ero_dep_fortran.ilk"
    COMPILER : ifort
    COMPFLAGS : /nologo /fpp /Qprec /MD /fp:source /assume:bscc -I"C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\mkl\include"  -I"C:\Program Files\Polyspace\R2019b\extern\include"  /DMATLAB_DEFAULT_RELEASE=R2017b  /DUSE_MEX_CMD   /DMATLAB_MEX_FILE -Qopenmp -Qmkl /integer-size:64
    COMPDEFINES : /DMATLAB_DEFAULT_RELEASE=R2017b  /DUSE_MEX_CMD   /DMATLAB_MEX_FILE
    OPTIMFLAGS : /O2 /DNDEBUG
    INCLUDE : -I"C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\mkl\include"  -I"C:\Program Files\Polyspace\R2019b\extern\include"
    DEBUGFLAGS : /Z7
    LINKER : link
    LINKFLAGS :  /nologo /manifest /INCREMENTAL:NO
    LINKTYPE : /DLL
    LINKEXPORT :  /EXPORT:MEXFUNCTION
    LINKEXPORTVER :  /EXPORT:MEXFUNCTION /EXPORT:MEXFILEREQUIREDAPIVERSION
    LINKLIBS : "/LIBPATH:C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\mkl\lib\intel64"   /LIBPATH:"C:\Program Files\Polyspace\R2019b\extern\lib\win64\microsoft" libmx.lib libmex.lib libmat.lib  kernel32.lib user32.lib gdi32.lib winspool.lib comdlg32.lib advapi32.lib shell32.lib  ole32.lib oleaut32.lib uuid.lib odbc32.lib odbccp32.lib
    LINKDEBUGFLAGS : /debug /PDB:"ero_dep_fortran.mexw64.pdb"
    LINKOPTIMFLAGS : 
    OBJEXT : .obj
    LDEXT : .mexw64
    SETENV : set COMPILER=ifort
                set COMPFLAGS=/c /nologo /fpp /Qprec /MD /fp:source /assume:bscc -I"C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\mkl\include"  -I"C:\Program Files\Polyspace\R2019b\extern\include"  /DMATLAB_DEFAULT_RELEASE=R2017b  /DUSE_MEX_CMD   /DMATLAB_MEX_FILE -Qopenmp -Qmkl /integer-size:64 /DMATLAB_DEFAULT_RELEASE=R2017b  /DUSE_MEX_CMD   /DMATLAB_MEX_FILE $MATLABMEX
                set OPTIMFLAGS=/O2 /DNDEBUG
                set DEBUGFLAGS=/Z7
                set LINKER=link
                set LINKFLAGS= /nologo /manifest /INCREMENTAL:NO /export:%ENTRYPOINT% /DLL "/LIBPATH:C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\mkl\lib\intel64"   /LIBPATH:"C:\Program Files\Polyspace\R2019b\extern\lib\win64\microsoft" libmx.lib libmex.lib libmat.lib  kernel32.lib user32.lib gdi32.lib winspool.lib comdlg32.lib advapi32.lib shell32.lib  ole32.lib oleaut32.lib uuid.lib odbc32.lib odbccp32.lib  /EXPORT:MEXFUNCTION
                set LINKDEBUGFLAGS=/debug /PDB:"%OUTDIR%%MEX_NAME%.mexw64.pdb"
                set NAME_OUTPUT=/out:"%OUTDIR%%MEX_NAME%%MEX_EXT%"
    FORTRANROOT : C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows
    VCROOT : C:\Program Files (x86)\Microsoft Visual Studio 14.0\VC
    SDKROOT : C:\Program Files (x86)\Windows Kits\8.1\
    KITSROOT : C:\Program Files (x86)\Windows Kits\10\
    MATLABROOT : C:\Program Files\Polyspace\R2019b
    ARCH : win64
    SRC : "C:\Users\zk1357\Desktop\Evolution_Code_Doubon\ero_dep_fortran.F";"C:\Users\zk1357\Desktop\Evolution_Code_Doubon\Module.F";"C:\Users\zk1357\Desktop\Evolution_Code_Doubon\prepare_bank_collapse.F";"C:\Users\zk1357\Desktop\Evolution_Code_Doubon\LINEAR_ELASTIC_STIFFNESS.F";"C:\Users\zk1357\Desktop\Evolution_Code_Doubon\FAILURE_CRITERION.F";"C:\Users\zk1357\Desktop\Evolution_Code_Doubon\OUTPUT.F";"C:\Users\zk1357\Desktop\Evolution_Code_Doubon\pardisonew.F";"C:\Program Files\Polyspace\R2019b\extern\version\fortran_mexapi_version.F"
    OBJ : C:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\ero_dep_fortran.obj;C:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\Module.obj;C:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\prepare_bank_collapse.obj;C:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\LINEAR_ELASTIC_STIFFNESS.obj;C:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\FAILURE_CRITERION.obj;C:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\OUTPUT.obj;C:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\pardisonew.obj;C:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\fortran_mexapi_version.obj
    OBJS : C:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\ero_dep_fortran.obj C:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\Module.obj C:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\prepare_bank_collapse.obj C:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\LINEAR_ELASTIC_STIFFNESS.obj C:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\FAILURE_CRITERION.obj C:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\OUTPUT.obj C:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\pardisonew.obj C:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\fortran_mexapi_version.obj 
    SRCROOT : C:\Users\zk1357\Desktop\Evolution_Code_Doubon\ero_dep_fortran
    DEF : C:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\ero_dep_fortran.def
    EXP : "ero_dep_fortran.exp"
    LIB : "ero_dep_fortran.lib"
    EXE : ero_dep_fortran.mexw64
    ILK : "ero_dep_fortran.ilk"
    MANIFEST : "ero_dep_fortran.mexw64.manifest"
    TEMPNAME : ero_dep_fortran
    EXEDIR : 
    EXENAME : ero_dep_fortran
    OPTIM : /O2 /DNDEBUG
    LINKOPTIM : 
    CMDLINE100_0 : ifort /c /nologo /fpp /Qprec /MD /fp:source /assume:bscc -I"C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\mkl\include"  -I"C:\Program Files\Polyspace\R2019b\extern\include"  /DMATLAB_DEFAULT_RELEASE=R2017b  /DUSE_MEX_CMD   /DMATLAB_MEX_FILE -Qopenmp -Qmkl /integer-size:64 /O2 /DNDEBUG "C:\Users\zk1357\Desktop\Evolution_Code_Doubon\ero_dep_fortran.F" /FoC:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\ero_dep_fortran.obj
    CMDLINE100_1 : ifort /c /nologo /fpp /Qprec /MD /fp:source /assume:bscc -I"C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\mkl\include"  -I"C:\Program Files\Polyspace\R2019b\extern\include"  /DMATLAB_DEFAULT_RELEASE=R2017b  /DUSE_MEX_CMD   /DMATLAB_MEX_FILE -Qopenmp -Qmkl /integer-size:64 /O2 /DNDEBUG "C:\Users\zk1357\Desktop\Evolution_Code_Doubon\Module.F" /FoC:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\Module.obj
    CMDLINE100_2 : ifort /c /nologo /fpp /Qprec /MD /fp:source /assume:bscc -I"C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\mkl\include"  -I"C:\Program Files\Polyspace\R2019b\extern\include"  /DMATLAB_DEFAULT_RELEASE=R2017b  /DUSE_MEX_CMD   /DMATLAB_MEX_FILE -Qopenmp -Qmkl /integer-size:64 /O2 /DNDEBUG "C:\Users\zk1357\Desktop\Evolution_Code_Doubon\prepare_bank_collapse.F" /FoC:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\prepare_bank_collapse.obj
    CMDLINE100_3 : ifort /c /nologo /fpp /Qprec /MD /fp:source /assume:bscc -I"C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\mkl\include"  -I"C:\Program Files\Polyspace\R2019b\extern\include"  /DMATLAB_DEFAULT_RELEASE=R2017b  /DUSE_MEX_CMD   /DMATLAB_MEX_FILE -Qopenmp -Qmkl /integer-size:64 /O2 /DNDEBUG "C:\Users\zk1357\Desktop\Evolution_Code_Doubon\LINEAR_ELASTIC_STIFFNESS.F" /FoC:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\LINEAR_ELASTIC_STIFFNESS.obj
    CMDLINE100_4 : ifort /c /nologo /fpp /Qprec /MD /fp:source /assume:bscc -I"C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\mkl\include"  -I"C:\Program Files\Polyspace\R2019b\extern\include"  /DMATLAB_DEFAULT_RELEASE=R2017b  /DUSE_MEX_CMD   /DMATLAB_MEX_FILE -Qopenmp -Qmkl /integer-size:64 /O2 /DNDEBUG "C:\Users\zk1357\Desktop\Evolution_Code_Doubon\FAILURE_CRITERION.F" /FoC:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\FAILURE_CRITERION.obj
    CMDLINE100_5 : ifort /c /nologo /fpp /Qprec /MD /fp:source /assume:bscc -I"C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\mkl\include"  -I"C:\Program Files\Polyspace\R2019b\extern\include"  /DMATLAB_DEFAULT_RELEASE=R2017b  /DUSE_MEX_CMD   /DMATLAB_MEX_FILE -Qopenmp -Qmkl /integer-size:64 /O2 /DNDEBUG "C:\Users\zk1357\Desktop\Evolution_Code_Doubon\OUTPUT.F" /FoC:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\OUTPUT.obj
    CMDLINE100_6 : ifort /c /nologo /fpp /Qprec /MD /fp:source /assume:bscc -I"C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\mkl\include"  -I"C:\Program Files\Polyspace\R2019b\extern\include"  /DMATLAB_DEFAULT_RELEASE=R2017b  /DUSE_MEX_CMD   /DMATLAB_MEX_FILE -Qopenmp -Qmkl /integer-size:64 /O2 /DNDEBUG "C:\Users\zk1357\Desktop\Evolution_Code_Doubon\pardisonew.F" /FoC:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\pardisonew.obj
    CMDLINE100_7 : ifort /c /nologo /fpp /Qprec /MD /fp:source /assume:bscc -I"C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\mkl\include"  -I"C:\Program Files\Polyspace\R2019b\extern\include"  /DMATLAB_DEFAULT_RELEASE=R2017b  /DUSE_MEX_CMD   /DMATLAB_MEX_FILE -Qopenmp -Qmkl /integer-size:64 /O2 /DNDEBUG "C:\Program Files\Polyspace\R2019b\extern\version\fortran_mexapi_version.F" /FoC:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\fortran_mexapi_version.obj
-------------------------------------------------------------------
Building with 'Intel Parallel Studio XE 2017 for Fortran with Microsoft Visual Studio 2015'.
ifort /c /nologo /fpp /Qprec /MD /fp:source /assume:bscc -I"C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\mkl\include"  -I"C:\Program Files\Polyspace\R2019b\extern\include"  /DMATLAB_DEFAULT_RELEASE=R2017b  /DUSE_MEX_CMD   /DMATLAB_MEX_FILE -Qopenmp -Qmkl /integer-size:64 /O2 /DNDEBUG "C:\Users\zk1357\Desktop\Evolution_Code_Doubon\ero_dep_fortran.F" /FoC:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\ero_dep_fortran.obj
ifort /c /nologo /fpp /Qprec /MD /fp:source /assume:bscc -I"C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\mkl\include"  -I"C:\Program Files\Polyspace\R2019b\extern\include"  /DMATLAB_DEFAULT_RELEASE=R2017b  /DUSE_MEX_CMD   /DMATLAB_MEX_FILE -Qopenmp -Qmkl /integer-size:64 /O2 /DNDEBUG "C:\Users\zk1357\Desktop\Evolution_Code_Doubon\Module.F" /FoC:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\Module.obj
ifort /c /nologo /fpp /Qprec /MD /fp:source /assume:bscc -I"C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\mkl\include"  -I"C:\Program Files\Polyspace\R2019b\extern\include"  /DMATLAB_DEFAULT_RELEASE=R2017b  /DUSE_MEX_CMD   /DMATLAB_MEX_FILE -Qopenmp -Qmkl /integer-size:64 /O2 /DNDEBUG "C:\Users\zk1357\Desktop\Evolution_Code_Doubon\prepare_bank_collapse.F" /FoC:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\prepare_bank_collapse.obj
ifort /c /nologo /fpp /Qprec /MD /fp:source /assume:bscc -I"C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\mkl\include"  -I"C:\Program Files\Polyspace\R2019b\extern\include"  /DMATLAB_DEFAULT_RELEASE=R2017b  /DUSE_MEX_CMD   /DMATLAB_MEX_FILE -Qopenmp -Qmkl /integer-size:64 /O2 /DNDEBUG "C:\Users\zk1357\Desktop\Evolution_Code_Doubon\LINEAR_ELASTIC_STIFFNESS.F" /FoC:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\LINEAR_ELASTIC_STIFFNESS.obj
ifort /c /nologo /fpp /Qprec /MD /fp:source /assume:bscc -I"C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\mkl\include"  -I"C:\Program Files\Polyspace\R2019b\extern\include"  /DMATLAB_DEFAULT_RELEASE=R2017b  /DUSE_MEX_CMD   /DMATLAB_MEX_FILE -Qopenmp -Qmkl /integer-size:64 /O2 /DNDEBUG "C:\Users\zk1357\Desktop\Evolution_Code_Doubon\FAILURE_CRITERION.F" /FoC:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\FAILURE_CRITERION.obj
ifort /c /nologo /fpp /Qprec /MD /fp:source /assume:bscc -I"C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\mkl\include"  -I"C:\Program Files\Polyspace\R2019b\extern\include"  /DMATLAB_DEFAULT_RELEASE=R2017b  /DUSE_MEX_CMD   /DMATLAB_MEX_FILE -Qopenmp -Qmkl /integer-size:64 /O2 /DNDEBUG "C:\Users\zk1357\Desktop\Evolution_Code_Doubon\OUTPUT.F" /FoC:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\OUTPUT.obj
ifort /c /nologo /fpp /Qprec /MD /fp:source /assume:bscc -I"C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\mkl\include"  -I"C:\Program Files\Polyspace\R2019b\extern\include"  /DMATLAB_DEFAULT_RELEASE=R2017b  /DUSE_MEX_CMD   /DMATLAB_MEX_FILE -Qopenmp -Qmkl /integer-size:64 /O2 /DNDEBUG "C:\Users\zk1357\Desktop\Evolution_Code_Doubon\pardisonew.F" /FoC:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\pardisonew.obj
ifort /c /nologo /fpp /Qprec /MD /fp:source /assume:bscc -I"C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\mkl\include"  -I"C:\Program Files\Polyspace\R2019b\extern\include"  /DMATLAB_DEFAULT_RELEASE=R2017b  /DUSE_MEX_CMD   /DMATLAB_MEX_FILE -Qopenmp -Qmkl /integer-size:64 /O2 /DNDEBUG "C:\Program Files\Polyspace\R2019b\extern\version\fortran_mexapi_version.F" /FoC:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\fortran_mexapi_version.obj
link  /nologo /manifest /INCREMENTAL:NO /DLL   /EXPORT:MEXFUNCTION /EXPORT:MEXFILEREQUIREDAPIVERSION C:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\ero_dep_fortran.obj C:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\Module.obj C:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\prepare_bank_collapse.obj C:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\LINEAR_ELASTIC_STIFFNESS.obj C:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\FAILURE_CRITERION.obj C:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\OUTPUT.obj C:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\pardisonew.obj C:\Users\zk1357\AppData\Local\Temp\mex_155853875819566_16652\fortran_mexapi_version.obj  "/LIBPATH:C:\Program Files (x86)\IntelSWTools\compilers_and_libraries_2017.5.267\windows\mkl\lib\intel64"   /LIBPATH:"C:\Program Files\Polyspace\R2019b\extern\lib\win64\microsoft" libmx.lib libmex.lib libmat.lib  kernel32.lib user32.lib gdi32.lib winspool.lib comdlg32.lib advapi32.lib shell32.lib  ole32.lib oleaut32.lib uuid.lib odbc32.lib odbccp32.lib /out:ero_dep_fortran.mexw64
  Creating ero_dep_fortran.lib and ero_dep_fortran.exp

mt -outputresource:ero_dep_fortran.mexw64;2 -manifest "ero_dep_fortran.mexw64.manifest"
Microsoft (R) Manifest Tool version 6.3.9600.17336

Copyright (c) Microsoft Corporation 2012. 

All rights reserved.


del "ero_dep_fortran.exp" "ero_dep_fortran.lib" "ero_dep_fortran.mexw64.manifest" "ero_dep_fortran.ilk"
MEX completed successfully.

Solution

  • The most probable reason is the incompatibility between the default integer size and MKL library interface version.

    LP64 requires 4-byte integers, ILP64 requires 8-byte ones. mex by default adds the /integer-size:64 option, thus making integers 8-byte long. But according to the documentation, with /Qmkl option the compiler links against LP64 libraries.

    To fix the problem you need to link against ILP64 libraries explicitly. To that aim remove /Qopenmp /Qmkl and use -lmkl_intel_ilp64.lib -lmkl_intel_thread.lib -lmkl_core.lib libiomp5md.lib link options.