I built a function that displays some evaluation metrics for a single model, and now I want to apply this function to a pool of models I have estimated.
The inputs of the old function was:
OldFunction(code: str, x, X_train: np.array, X_test: np.array, X:pd.DataFrame)
Where:
code is a string used to create the column name of the dataframe
x is the model name
X_train and X_test are np.arrays of the data splitter
X is the dataframe of the whole data
In order to estimate the metrics for a pool of models, I tried to modify my function by adding a loop in my function and put the models in a list.
But it doesn't work.
The problem arises because I can't iterate over a list of models, so what option I have? Do you have some idea?
I leave the new function below.
import numpy as np
import pandas as pd
from sklearn.metrics import roc_curve, auc
from sklearn.metrics import accuracy_score, recall_score, precision_score
from sklearn.model_selection import cross_val_score
def displaymetrics(code: list, models: list, X_train: np.array, X_test: np.array, X: pd.DataFrame):
for i in models:
y_score = models[i].fit(X_train, y_train).decision_function(X_test)
fpr, tpr, _ = roc_curve(y_test, y_score)
roc_auc = auc(fpr, tpr)
# Traditional Scores
y_pred = pd.DataFrame(model[i].predict(X_train)).reset_index(drop=True)
Recall_Train,Precision_Train, Accuracy_Train = recall_score(y_train, y_pred), precision_score(y_train, y_pred), accuracy_score(y_train, y_pred)
y_pred = pd.DataFrame(model[i].predict(X_test)).reset_index(drop=True)
Recall_Test = recall_score(y_test, y_pred)
Precision_Test = precision_score(y_test, y_pred)
Accuracy_Test = accuracy_score(y_test, y_pred)
#Cross Validation
cv_au = cross_val_score(models[i], X_test, y_test, cv=30, scoring='roc_auc')
cv_f1 = cross_val_score(models[i], X_test, y_test, cv=30, scoring='f1')
cv_pr = cross_val_score(models[i], X_test, y_test, cv=30, scoring='precision')
cv_re = cross_val_score(models[i], X_test, y_test, cv=30, scoring='recall')
cv_ac = cross_val_score(models[i], X_test, y_test, cv=30, scoring='accuracy')
cv_ba = cross_val_score(models[i], X_test, y_test, cv=30, scoring='balanced_accuracy')
cv_au_m, cv_au_std = cv_au.mean() , cv_au.std()
cv_f1_m, cv_f1_std = cv_f1.mean() , cv_f1.std()
cv_pr_m, cv_pr_std = cv_pr.mean() , cv_pr.std()
cv_re_m, cv_re_std= cv_re.mean() , cv_re.std()
cv_ac_m, cv_ac_std = cv_ac.mean() , cv_ac.std()
cv_ba_m, cv_ba_std= cv_ba.mean() , cv_ba.std()
cv_au, cv_f1, cv_pr = (cv_au_m, cv_au_std), (cv_f1_m, cv_f1_std), (cv_pr_m, cv_pr_std)
cv_re, cv_ac, cv_ba = (cv_re_m, cv_re_std), (cv_ac_m, cv_ac_std), (cv_ba_m, cv_ba_std)
tuples = [cv_au, cv_f1, cv_pr, cv_re, cv_ac, cv_ba]
tuplas = [0]*len(tuples)
for i in range(len(tuples)):
tuplas[i] = [round(x,4) for x in tuples[i]]
results = pd.DataFrame()
results['Metrics'] = ['roc_auc', 'Accuracy_Train', 'Precision_Train', 'Recall_Train', 'Accuracy_Test',
'Precision_Test','Recall_Test', 'cv_roc-auc (mean, std)', 'cv_f1score(mean, std)',
'cv_precision (mean, std)', 'cv_recall (mean, std)', 'cv_accuracy (mean, std)',
'cv_bal_accuracy (mean, std)']
results.set_index(['Metrics'], inplace=True)
results['Model_'+code[i]] = [roc_auc, Accuracy_Train, Precision_Train, Recall_Train, Accuracy_Test,
Precision_Test, Recall_Test, tuplas[0], tuplas[1], tuplas[2], tuplas[3],
tuplas[4], tuplas[5]]
return results
The output should be a dataframe where each column represents each model and the row the metrics.
You should probably mention if there was an error or if just the output is not correct. I will assume that you have an error.
Are you sure that you are passing models as a list when calling displaymetrics
?
E.g.
models = [model1, model2, ...]
displaymetrics(code, models, X_train, X_test, X)
Also, there is an error in your code:
You call models[i].fit(...)
but i
is a model itself. You should just do i.fit(...)
or better change the name i
because it usually refers to an iterating over stuff. (You should use for i in range(0, len(models)): ...
if you want to iterate over the indexes of the list.)
Note: You shouldn't import pandas and numpy for every model iteration. I also suggest you to put all imports (of the sklearn modules) in the upper part of your code.
So, I think your code should look like this:
import numpy as np
import pandas as pd
from sklearn.metrics import roc_curve, auc
from sklearn.metrics import accuracy_score, recall_score, precision_score
from sklearn.model_selection import cross_val_score
def displaymetrics(code: list, models: list, X_train: np.array, X_test: np.array, X: pd.DataFrame):
for model in models: # or for i in range(0, len(models)):
y_score = model.fit(X_train, y_train).decision_function(X_test)
# or y_score = models[i].fit(X_train, y_train).decision_function(X_test)
fpr, tpr, _ = roc_curve(y_test, y_score)
# etc etc
Try editing your code in order to show us how you call displaymetrics
and with what arguments.