I'm trying to run a local r package and store the result it returned.
I've put the R package in the same directory as the python script. I've imported importr
from rpy2.robjects.packages
and had imported the utils
package.
When I call the install.packages like this
from rpy2.robjects.packages import importr
utils = rpackages.importr('utils')
utils.install_packages('impactr_3.gz', repos = NULL, type="source")
The error produced was:
NameError: name 'NULL' is not defined.
How do I load this local R package with rpy2
?
Unless you define it, Python will not know any NULL
(hence the error). If you want to use R's NULL
, you can find it as rpy2.robjects.NULL
or rpy2.rinterface.NULL
.
Otherwise, the documentation for the R function you want to use indicates that paths can also be specified with the prefix file://
:
utils.install_packages('file://impactr_1.0.1.tar.gz', type = "source")