matlabcommon-data-format

'cdfread' not reading .cdf file Matlab


I am not able to read '.cdf' files using Matlab cdfread function. I have also tried netcdf The file 'mvn_lpw_l2_lpnt_20180814_v03_r02.cdf' is available here:

CDF file

I am using Matlab R2015a (release 8.5).

Any help please.


Solution

  • To read the data from NASA Space Physics Data Facility (SPDF) you are encouraged to use the CDF handling library from SPDF. This version of the library is provided for free and can be downloaded directly from SPDF. The Installation instructions are fairly straightforward and there is little that can be added to it.

    The version of cdflib that comes with MATLAB does not support some of the features used in MAVEN files. With MATLAB provided CDFLIB running on MATLAB 2017a (9.2.0) you get

    >> cdfinfo('mvn_lpw_l2_lpnt_20180814_v03_r02.cdf')
    Error using cdflibmex
    33 is not a recognized DATATYPE mode.
    [... stack trace ...]    
    
    >> data = cdfread('mvn_lpw_l2_lpnt_20180814_v03_r02.cdf')
    Error using cdflibmex
    33 is not a recognized DATATYPE mode.
    [... stack trace ...]    
    

    With SPDF version of CDF routines you would get the correct output:

    >> mvninfo = spdfcdfinfo('mvn_lpw_l2_lpnt_20180814_v03_r02.cdf')
    
    mvninfo = 
    
      struct with fields:
    
                  Filename: 'mvn_lpw_l2_lpnt_20180814_v03_r02.cdf'
               FileModDate: '01-Jan-2019 03:18:45'
                  FileSize: 2579209
                    Format: 'CDF'
             FormatVersion: '3.6.3'
              FileSettings: [1×1 struct]
                  Subfiles: {}
                 Variables: {7×12 cell}
          GlobalAttributes: [1×1 struct]
        VariableAttributes: [1×1 struct]
                LibVersion: '3.7.0'
              PatchVersion: '3.7.0.0'
    

    And spdfcdfread returns the data as a MATLAB array

    >> mvndata = spdfcdfread('mvn_lpw_l2_lpnt_20180814_v03_r02.cdf')
    
    mvndata =
    
      1×7 cell array
    
      Columns 1 through 3
    
        [17532×10 single]    [17532×1 double]    [17532×1 double]
    
      Columns 4 through 6
    
        [17532×10 single]    [17532×10 single]    [17532×1 single]
    
      Column 7
    
        [17532×1 single]
    

    A probable cause for the error in MATLAB CDFLIB functions comes from the TT2000 datatype that is used for the epoch variable in MAVEN files.

      data       epoch      time_unix    ddata_lo    ddata_up      flag        info  
    ________    ________    _________    ________    ________    ________    ________
    
    'single'    'tt2000'    'double'     'single'    'single'    'single'    'single'