All of my tables are InnoDB but PHPMyAdmin shows that the database is MyIsam: http://img708.imageshack.us/i/201103080940551280x800s.png/ How do I create new MySQL databases using InnoDB? Running MySQL 5.1, in a Debian Sid box. Thank you.
AFAIK it is showing MyISAM because that is your default storage engine on that database, i.e. if you were to create a new table and not specify the engine then it would be MyISAM.
You can change the default storage engine in your my.cnf file:
default-storage-engine=INNODB