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apache-sparkhadoophadoop-yarnhadoop2

Spark on Yarn Container Failure

For reference: I solved this issue by adding Netty 4.1.17 in hadoop/share/hadoop/common

No matter what jar I try and run (including the example from https://spark.apache.org/docs/latest/running-on-yarn.html), I keep getting an error regarding container failure when running Spark on Yarn. I get this error in the command prompt:

Diagnostics: Exception from container-launch.
Container id: container_1530118456145_0001_02_000001
Exit code: 1
Stack trace: ExitCodeException exitCode=1:
    at org.apache.hadoop.util.Shell.runCommand(Shell.java:585)
    at org.apache.hadoop.util.Shell.run(Shell.java:482)
    at org.apache.hadoop.util.Shell$ShellCommandExecutor.execute(Shell.java:776)
    at org.apache.hadoop.yarn.server.nodemanager.DefaultContainerExecutor.launchContainer(DefaultContainerExecutor.java:212)
    at org.apache.hadoop.yarn.server.nodemanager.containermanager.launcher.ContainerLaunch.call(ContainerLaunch.java:302)
    at org.apache.hadoop.yarn.server.nodemanager.containermanager.launcher.ContainerLaunch.call(ContainerLaunch.java:82)
    at java.util.concurrent.FutureTask.run(FutureTask.java:266)
    at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
    at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
    at java.lang.Thread.run(Thread.java:745)

When I look at the logs, I then find this error:

Exception in thread "main" java.lang.NoSuchMethodError:io.netty.buffer.PooledByteBufAllocator.metric()Lio/netty/buffer/PooledByteBufAllocatorMetric;
    at org.apache.spark.network.util.NettyMemoryMetrics.registerMetrics(NettyMemoryMetrics.java:80)
    at org.apache.spark.network.util.NettyMemoryMetrics.<init>(NettyMemoryMetrics.java:76)
    at org.apache.spark.network.client.TransportClientFactory.<init>(TransportClientFactory.java:109)
    at org.apache.spark.network.TransportContext.createClientFactory(TransportContext.java:99)
    at org.apache.spark.rpc.netty.NettyRpcEnv.<init>(NettyRpcEnv.scala:71)
    at org.apache.spark.rpc.netty.NettyRpcEnvFactory.create(NettyRpcEnv.scala:461)
    at org.apache.spark.rpc.RpcEnv$.create(RpcEnv.scala:57)
    at org.apache.spark.deploy.yarn.ApplicationMaster.runExecutorLauncher(ApplicationMaster.scala:530)
    at org.apache.spark.deploy.yarn.ApplicationMaster.org$apache$spark$deploy$yarn$ApplicationMaster$$runImpl(ApplicationMaster.scala:347)
    at org.apache.spark.deploy.yarn.ApplicationMaster$$anonfun$run$2.apply$mcV$sp(ApplicationMaster.scala:260)
    at org.apache.spark.deploy.yarn.ApplicationMaster$$anonfun$run$2.apply(ApplicationMaster.scala:260)
    at org.apache.spark.deploy.yarn.ApplicationMaster$$anonfun$run$2.apply(ApplicationMaster.scala:260)
    at org.apache.spark.deploy.yarn.ApplicationMaster$$anon$5.run(ApplicationMaster.scala:815)
    at java.security.AccessController.doPrivileged(Native Method)
    at javax.security.auth.Subject.doAs(Subject.java:422)
    at org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1758)
    at org.apache.spark.deploy.yarn.ApplicationMaster.doAsUser(ApplicationMaster.scala:814)
    at org.apache.spark.deploy.yarn.ApplicationMaster.run(ApplicationMaster.scala:259)
    at org.apache.spark.deploy.yarn.ApplicationMaster$.main(ApplicationMaster.scala:839)
    at org.apache.spark.deploy.yarn.ExecutorLauncher$.main(ApplicationMaster.scala:869)
    at org.apache.spark.deploy.yarn.ExecutorLauncher.main(ApplicationMaster.scala)

Any idea why this is happening? This is running on a pseudo-distributed cluster set up according to this tutorial: https://wiki.apache.org/hadoop/Hadoop2OnWindows. Spark runs fine locally, and seeing as this jar was provided with Spark, I doubt it's a problem within the jar. (Regardless, I added a Netty dependency inside another jar and I'm still getting the same error).

The only thing set in my spark-defaults.conf is spark.yarn.jars, which points to a hdfs directory where I uploaded all of Spark's jars. io.netty.buffer.PooledByteBufAllocator is contained within these jars.

Spark 2.3.1, Hadoop 2.7.6

Solution

  • I had exactly same issue. Previously I used Hadoop 2.6.5 and the compatible spark version, things worked out fine. When I switched to Hadoop 2.7.6, problem occurred. Not sure what is cause, but I copied to netty.4.1.17.Final jar file to the hadoop library folder then the problem goes away.