I'm trying to plot multiple plots on a grid using ggplot2 in a for loop, followed by grid.arrange
. But all the plots are identical afterwards.
library(ggplot2)
library(grid)
test = data.frame(matrix(rnorm(320), ncol=16 ))
names(test) = sapply(1:16, function(x) paste0("var_",as.character(x)))
plotlist = list()
for (i in 1:(dim(test)[2]-1)){
plotlist[[i]] = ggplot(test) +
geom_point(aes(get(x=names(test)[dim(test)[2]]), y=get(names(test)[i])))
}
pdf("output.pdf")
do.call(grid.arrange, list(grobs=plotlist, nrow=3))
dev.off(4)
When running this code, it seems like the get()
calls are only evaluated at the time of the grid.arrange
call, so all of the y vectors in the plot are identical as "var_15". Is there a way to force get evaluation immediately, so that I get 15 different plots?
Thanks!
Here are two ways that use purrr::map
functions instead of a for-loop. I find that I have less of a clear sense of what's going on when I try to use loops, and since there are functions like the apply
and map
families that fit so neatly into R's vector operations paradigm, I generally go with mapping instead.
The first example makes use of cowplot::plot_grid
, which can take a list of plots and arrange them. The second uses the newer patchwork
package, which lets you add plots together—like literally saying plot1 + plot2
—and add a layout. To do all those additions, I use purrr::reduce
with +
as the function being applied to all the plots.
library(tidyverse)
set.seed(722)
test = data.frame(matrix(rnorm(320), ncol=16 ))
names(test) = sapply(1:16, function(x) paste0("var_",as.character(x)))
# extract all but last column
xvars <- test[, -ncol(test)]
By using purrr::imap
, I can map over all the columns and apply a function with 2 arguments: the column itself, and its name. That way I can set an x-axis label that specifies the column name. I can also easily access the column of data without having to use get
or any tidyeval tricks (although for something for complicated, a tidyeval solution might be better).
plots <- imap(xvars, function(variable, var_name) {
df <- data_frame(x = variable, y = test[, ncol(test)])
ggplot(df, aes(x = x, y = y)) +
geom_point() +
xlab(var_name)
})
cowplot::plot_grid(plotlist = plots, nrow = 3)
library(patchwork)
# same as plots[[1]] + plots[[2]] + plots[[3]] + ...
reduce(plots, `+`) + plot_layout(nrow = 3)
Created on 2018-07-22 by the reprex package (v0.2.0).