Here is my script
library(Rcpp)
library(inline)
myroot2 <- rcpp(signature(xs="numeric"), body='double x=as<double>(xs); return wrap(::sqrt(x));')
print(myroot2(100))
If I source this script from R it runs just fine
>source('test.R')
Attaching package: ‘inline’
The following object is masked from ‘package:Rcpp’:
registerPlugin
[1] 10
In batch mode
Rscript --verbose test.R
running
'/usr/local/share/bcbio/anaconda/lib/R/bin/R --slave --no-restore --
file=test.R'
Attaching package: ‘inline’
The following object is masked from ‘package:Rcpp’:
registerPlugin
Error in signature(xs = "numeric") : could not find function
"signature"
Calls: rcpp -> cxxfunction
Execution halted
How to fix this?
The signature
function is in methods
, which apparently is not loaded by default with Rscript
. Try this:
library(Rcpp)
library(inline)
myroot2 <- rcpp(methods::signature(xs="numeric"), body='double x=as<double>(xs); return wrap(::sqrt(x));')
print(myroot2(100))
where the only change was to use methods::signature
.