I'm trying to install Rgdal package on my local server (no connected to internet). when I ran install.packages("rgdal_1.2-15.tar.gz","/usr/lib64/R/library/",repos=NULL) I got an error inverser.c:4:22: error: projects.h: No such file or directory
this is the out put of install process:
* installing *source* package ‘rgdal’ ...
** package ‘rgdal’ successfully unpacked and MD5 sums checked
configure: CC: gcc -m64 -std=gnu99
configure: CXX: g++ -m64
configure: rgdal: 1.2-15
checking for /usr/bin/svnversion... no
configure: svn revision: 691
checking for gdal-config... /usr/bin/gdal-config
checking gdal-config usability... yes
configure: GDAL: 1.8.1
checking GDAL version >= 1.6.3... yes
checking gdal: linking with --libs only... yes
checking GDAL: /usr/share/gdal/pcs.csv readable... yes
configure: -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -fpic -fPIC -I/usr/include/gdal
checking proj_api.h presence and usability... yes
checking PROJ.4 version: ... 4.8.0
checking PROJ.4: epsg found and readable... yes
checking PROJ.4: conus found and readable... yes
configure: Package CPP flags: -I/usr/include/gdal
configure: Package LIBS: -lgdal -lproj
configure: creating ./config.status
config.status: creating src/Makevars
** libs
g++ -m64 -std=c++0x -I/usr/include/R -DNDEBUG -I/usr/include/gdal -I/usr/local/include -I"/usr/lib64/R/library/sp/include" -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c OGR_write.cpp -o OGR_write.o
g++ -m64 -std=c++0x -I/usr/include/R -DNDEBUG -I/usr/include/gdal -I/usr/local/include -I"/usr/lib64/R/library/sp/include" -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -c gdal-bindings.cpp -o gdal-bindings.o
gcc -m64 -std=gnu99 -I/usr/include/R -DNDEBUG -I/usr/include/gdal -I/usr/local/include -I"/usr/lib64/R/library/sp/include" -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -fpic -fPIC -c init.c -o init.o
gcc -m64 -std=gnu99 -I/usr/include/R -DNDEBUG -I/usr/include/gdal -I/usr/local/include -I"/usr/lib64/R/library/sp/include" -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -fpic -fPIC -c inverser.c -o inverser.o
inverser.c:4:22: error: projects.h: No such file or directory
inverser.c:6: error: expected ‘)’ before ‘*’ token
make: *** [inverser.o] Error 1
ERROR: compilation failed for package ‘rgdal’
* removing ‘/usr/lib64/R/library/rgdal’
Warning message:
In install.packages("/data/ZUY10/Repo/R/rgdal_1.2-15.tar.gz", "/usr/lib64/R/library/", :
installation of package ‘/data/ZUY10/Repo/R/rgdal_1.2-15.tar.gz’ had non-zero exit status
What I did before this step:
Since my server is local, I had to install all package "dependencies" manually in my local server, So I installed like 30 packages manually which PROJ.4 and Gdal are principal as you can see here.
What do I miss here to install the RGDAL PACKAGE?
The header projects.h comes from PROJ.4. Where is that header file located on your system? You can pass this location to the configure script via --with-proj-include=DIR, i.e.
install.packages("rgdal_1.2-15.tar.gz",
"/usr/lib64/R/library/",
repos=NULL,
configure.args="--with-proj-include=DIR")
A check for projects.h being found has been added to rgdal only recently.