I started playing with the ggraph package since it looks very promising in terms of extra features it adds to the available plots of network graphs (see this tutorial). However, testing something fairly trivial, I'm already stuck. What I basically want to do is reproduce a simple dendrogram:
ArrestsDen <- as.dendrogram(hclust(dist(USArrests[1:5,])))
plot(ArrestsDen)
But this is how it looks in ggraph:
library(ggraph)
ggraph(ArrestsDen, 'dendrogram') +
geom_edge_elbow()
Instead of axis tick labels, it shows just 0,1,2 etc.. I already tried the usual ggplot2 "tricks" but without success:
ggraph(ArrestsDen, 'dendrogram') +
geom_edge_elbow() +
scale_x_discrete(labels = labels)
# create labels manually
labs <- labels(ArrestsDen)
names(labs) <- as.character(1:length(labels(ArrestsDen)))
class(labs)
ggraph(ArrestsDen, 'dendrogram') +
geom_edge_elbow() +
scale_x_discrete(labels = labs)
What am I missing?
You could try that:
ggraph(ArrestsDen, 'dendrogram') +
geom_edge_elbow() +
theme_bw() +
scale_x_continuous(breaks = c(0, 1, 2, 3, 4), label=c("Ark","Arizona","Cal", "Alab", "Alaska"))