I am conducting a meta-analysis in R with the metafor package. I followed the tutorial on http://www.metafor-project.org/doku.php/plots:forest_plot_with_subgroups
How can I add tau^2 to "RE Model for All studies"?
library(metafor)
### load BCG vaccine dataset
data(dat.bcg)
res <- rma(ai=tpos, bi=tneg, ci=cpos, di=cneg, data=dat.bcg, measure="OR",
slab=paste(author, year, sep=", "), method="REML")
###Plot Forest Plot
forest(res)
### Add Text
text(-5, -1, pos=4, cex=0.75, bquote(paste("RE Model for All Studies (Q
= ",.(formatC(res$QE, digits=2, format="f")), ", df = ", .(res$k -
res$p),", p = ", .(formatC(res$QEp, digits=2, format="f")), "; ", I^2, " = ",.(formatC(res$I2, digits=1, format="f")), "%)")))
Thanks in advance, C.
This will print a Greek tau with superscript-2 followed by two decimal places of the tau2 item in the res object:
text(-5, -0.5, pos=4, cex=0.75, bquote(
paste("RE Model for All Studies (Q = ",
.(formatC(res$QE, digits=2, format="f")),
", df = ", .(res$k - res$p),", p = ",
.(formatC(res$QEp, digits=2, format="f")),
"; ", I^2, " = ",
.(formatC(res$I2, digits=1, format="f")),
"%)", "; ", tau^2 ==
.(formatC(res$tau2, digits=2, format="f")))))
I moved the text up a half line so it didn't overwrite the summary OR-diamond. You should understand that you are actually using the plotmath
paste function and that means you can change tau
to Tau
if you want a capital-Greek-Tau. Read ?plotmath
.