I am trying to connect using pypyodbc and pandas to a postgres DB. I am using Python 2.7 on a Centos 7 machine.
import pypyodbc
import pandas as pd
conn = pypyodbc.connect("Driver={PostgreSQL};Server=xxx;Port=xxx;Database=xxx;Uid=xxx;Pwd=xxx;")
cur = conn.cursor()
cur.execute("select * from client_list")
col_names = []
for elt in cur.description:
col_names.append(elt[0])
myDF=pd.DataFrame(cur.fetchall(),columns=col_names)
conn.close()
My connection string points to a postgresql DB, for which I've configured an ODBC connection. I've configured both odbcinst.ini and odbc.ini:
/etc/odbc.ini -
[AlgoDB]
Description = PostgreSQL connection to 'AlgoDB' database
Driver = /usr/lib64/psqlodbc.so
Database = xxx
Servername = xxx
UserName = xxx
Password = xxx
Port = 5432
Protocol = 8.1
ReadOnly = No
RowVersioning = No
ShowSystemTables = No
ShowOidColumn = No
FakeOidIndex = No
/etc/odbcinst.ini:
[PostgreSQL]
Description = ODBC for PostgreSQL
Driver = /usr/lib/psqlodbcw.so
Setup = /usr/lib/libodbcpsqlS.so
Driver64 = /usr/lib64/psqlodbc.so
Setup64 = /usr/lib64/libodbcpsqlS.so
FileUsage = 1
I am able to retrieve the results of the query, however, the field names are returned in Chinese:
for index, row in myDF.iterrows():
print(row)
Resulting in:
汣敩瑮湟浡e my client's name
灡彰牵l浡e https://my client's url/
When I work with a windows machine, I get the attribute names as supposed in English:
client_name my client's name
client_url https://my client's url/
If I use isql and run the query there, the field names are in English:
sudo isql -v AlgoDB xxx xxx
What am I doing wrong?? Thank you.
I gave up on pypyodbc after trying to reinstall the ODBC drivers and switched to sqlalchemy:
import sqlalchemy as sa
import pandas as pd
eng = sa.create_engine("postgresql://user:pass@ip:5432/DBName")
myDF = pd.read_sql("select * from client_list",eng)