What do you think is best practise for running multiple website on the same machine, would you have separate containers set for each website/domain? Or have all the sites in the one container set?
Website 1, Website 2, Website 3:
or
Website 1:
Website 2:
Website 3:
I prefer to use separate containers for the individual websites but use a single webserver as proxy. This allows you to access all websites of different domains on the same host ports (80/443). Additionally you don't necessarily need to run multiple nginx containers.
Structure:
You can use automated config-generation for the proxy service such as jwilder/nginx-proxy that also opens the way to use convenient SSL-certification handling with e.g. jrcs/letsencrypt-nginx-proxy-companion.
The proxy service can then look like this: