I've a log-log plot, I got the regression line by using:
geom_smooth(formula = y ~ x, method='lm')
But now I'd like to obtain the equation of this line (e.g. y=a*x^(-b)) and print it. I managed to get it in a lin-lin plot but not in this case. Here's the code:
mydataS<-data.frame(DurPeak_h[],IntPeak[],IntPeakxDurPeak[],ID[]) #df peak
names(mydataS)<-c("x","y","ID","IDEVENT")
plotID<-ggplot(mydataS, aes(x=x, y=y, label=IDEVENT)) +
geom_text(check_overlap = TRUE, hjust = 0, nudge_x = 0.02)+
geom_point(colour="black", size = 2) + geom_point(aes(colour = ID)) +
geom_quantile(quantiles = qs, colour="green")+
scale_colour_gradient(low = "white", high="red") +
scale_x_log10(limits = c(min(DurEnd_h),max(DurEnd_h))) +
scale_y_log10(limits = c(min(IntEnd),max(IntEnd))) +
geom_smooth(formula = y ~ x, method='lm')
ggsave(height=7,"plot.pdf")
Did it with a workaround: using nls
to calculate the two parameters a and b, precisely:
nlsPeak <- coef(nls(y ~ a*(x)^b, data = mydataS, start = list(a=30, b=-0.1)))
then plotting the line with annotate
(see some examples here) and finally printing the equation using the function:
power_eqn = function(ds){
m = nls(y ~ a*x^b, start = list(a=30, b=-0.1), data = ds);
eq <- substitute(italic(y) == a ~italic(x)^b,
list(a = format(coef(m)[1], digits = 4),
b = format(coef(m)[2], digits = 2)))
as.character(as.expression(eq));
}
called as follow:
annotate("text",x = 3, y = 180,label = power_eqn(mydataS), parse=TRUE, col="black") +
Hope it helps!