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rmds

show coordinate of nmds plot in R


I was newly user of R, I want use this for make me reduce many dimension (60 column and 60 row) matrix I have, So I got the plot with this command

library(vegan)
set.seed(2)
example_NMDS=metaMDS(Dim_Matrix,k=4,trymax=100)
plot(example_NMDS)

But, what I want to get was the coordinat of the point in ploting result

enter image description here


Solution

  • Reffering on http://cc.oulu.fi/~jarioksa/softhelp/vegan/html/metaMDS.html

    We can get the coordinat/value/points by using this command

    scores(example_NMDS)