The company I work for is currently evaluating the Maximo Anywhere architecture. We are targeting Windows10 as our device platform, and are unsure of the benefits of using the Application Center for deployment. If we were to manage the application deployment through SCCM, will the app still function the same? Will there be any functionality that we will miss between the two deployment strategies for Windows10 devices?
Yes, there is no functional difference based on the distribution mechanism that you use.
Whether you deploy the app through the application center or an alternate MDM, the application will always work the same.