Following my question I would like to know what should I add in order to get the value of the node and to concatenate it to its name. I have a J48 decision tree:
library(RWeka)
data(iris)
res = J48(Species ~., data = iris)
> res
J48 pruned tree
------------------
Petal.Width <= 0.6: setosa (50.0)
Petal.Width > 0.6
| Petal.Width <= 1.7
| | Petal.Length <= 4.9: versicolor (48.0/1.0)
| | Petal.Length > 4.9
| | | Petal.Width <= 1.5: virginica (3.0)
| | | Petal.Width > 1.5: versicolor (3.0/1.0)
| Petal.Width > 1.7: virginica (46.0/1.0)
Number of Leaves : 5
Size of the tree : 9
and get as a result the following string:
( Petal.Width ( ) Petal.Width ( Petal.Length ( ) Petal.Width ( ) ) )
I would like to get the following (concatenation of values):
( Petal.Width0.6 ( ) Petal.Width1.7 ( Petal.Length4.9 ( ) Petal.Width1.5 ( ) ) )
Here is the code I use:
library("partykit")
pres <- as.party(res)
partykit:::.list.rules.party(pres)
nam <- names(pres$data)
tr <- as.list(pres$node)
str <- "("
update_str <- function(x) {
if(is.null(x$kids)) {
str <<- paste(str, ")")
} else {
str <<- paste(str, nam[x$split$varid], "(")
for(i in x$kids) update_str(tr[[i]])
}
}
update_str(tr[[1]])
> str
[1] "( Petal.Width ( ) Petal.Width ( Petal.Length ( ) Petal.Width ( ) ) )"
Just change the recursion:
update_str <- function(x) {
if(is.null(x$kids)) {
str <<- paste(str, ")")
} else {
str <<- paste(str, nam[x$split$varid], x$split$breaks, "(")
for(i in x$kids) update_str(tr[[i]])
}
}
update_str(tr[[1]])
> str
[1] "( Petal.Width 0.6 ( ) Petal.Width 1.7 ( Petal.Length 4.9 ( ) Petal.Width 1.5 ( ) ) )"