I have a graph G and its adjacency matrix. I want to convert it into Line Graph L(G) such that nodes of graph G becomes edges in L(G) and vice-versa.
Is there any package in R which can perform such interchange from nodes to edges and edges to nodes?
I wrote a little function that computes the adjacency matrix of the line graph:
LineGraph <- function(A) # A: adjacency matrix
{
n <- nrow(A)
m <- sum(A)/2 # m: number of edges
X <- lower.tri(A)*A # X: still the adjacency matrix,
X[which(X!=0)] <- 1:m # but edges are numbered
p <- which(X!=0)-1
edgeNames <- apply(matrix(c((p %% n)+1,p %/% n+1),m),1,
function(v){paste(sort(v),collapse=".")}) # names of the edges
X <- X + upper.tri(X)*t(X)
A.line <- matrix(0,m,m) # A.line will become the adjacency matrix of the line graph
rownames(A.line) <- edgeNames
colnames(A.line) <- edgeNames
apply(X,1,
function(x)
{
p <- which(x!=0)
q <- outer(x[p],m*(x[p]-1),"+")
A.line[c(q)] <<- 1
} )
A.line[(1:m)+m*(0:(m-1))] <- 0
return(A.line)
}
Example:
> A <- matrix( c(0,1,1,1,0,
+ 1,0,0,0,1,
+ 1,0,0,1,0,
+ 1,0,1,0,1,
+ 0,1,0,1,0), 5, 5 )
> LineGraph(A)
1.2 1.3 1.4 2.5 3.4 4.5
1.2 0 1 1 1 0 0
1.3 1 0 1 0 1 0
1.4 1 1 0 0 1 1
2.5 1 0 0 0 0 1
3.4 0 1 1 0 0 1
4.5 0 0 1 1 1 0
>