I want to save the dataframe df to the .h5 file MainDataFile.h5 :
df.to_hdf ("c:/Temp/MainDataFile.h5", "MainData", mode = "w", format = "table", data_columns=['_FirstDayOfPeriod','Category','ChannelId'])
and get the following error :
*** Exception: cannot find the correct atom type -> > [dtype->object,items->Index(['Libellé_Article', 'Libellé_segment'], dtype='object')]
If I modifify the column 'Libellé_Article' in this way :
df['Libellé_Article'] = str(df['Libellé_Article'])
there is no error anymore, whereas I still get the error message when doing :
df['Libellé_Article'] = df['Libellé_Article'].astype(str)
The problem is that using str() is blowing up my ram.
Any idea ?
str(df['Libellé_Article'])
will convert the contents of the entire column in to single string. It will end up with a very big string. And thats the reason for blowing up your RAM
For example
>> df = pd.DataFrame([1,2,3], columns=['A'])
>> df['A']
0 1
1 2
2 3
Name: A, dtype: int64
>> str(df['A'])
'0 1\n1 2\n2 3\nName: A, dtype: int64'
>> df['A'].astype(str)
0 1
1 2
2 3
Name: A, dtype: object
So you should use .astype(str)
only, if you want to convert your entire column to type string