Although there is some space left on the hard drive any insert on a table with the tokuDB storage engine fails with the error:
Error Code: 1021. Disk full (); waiting for someone to free some space... (errno: 189 "Disk full")
Inserts on other storage engines (e.g. innodb ) are still working.
There is a toku system parameter called: tokudb_fs_reserve_percent
Description: If this percentage of the filesystem is not free, inserts will be prohibited. Recommended value is half the size of the available memory. Once disabled, inserts will be re-enabled once twice the reserve is available. TokuDB will freeze entirely if the disk becomes entirely full. Scope: Global Dynamic: No Data Type: numeric Default Value: 5
So the default value is 5%. Either you change the paramter in your /etc/mysql/conf.d/tokudb.cnf to a lower value, e.g.
tokudb_fs_reserve_percent=0
or you free some disk space.