I'm trying to compile the following C-code:
struct data {
size_t n;
double * y;
double * sigma;
};
int
expb_f (const gsl_vector * x, void *data,
gsl_vector * f)
{
size_t n = ((struct data *)data)->n;
double *y = ((struct data *)data)->y;
double *sigma = ((struct data *) data)->sigma;
double A = gsl_vector_get (x, 0);
double lambda = gsl_vector_get (x, 1);
double b = gsl_vector_get (x, 2);
size_t i;
for (i = 0; i < n; i++)
{
/* Model Yi = A * exp(-lambda * i) + b */
double t = i;
double Yi = A * exp (-lambda * t) + b;
gsl_vector_set (f, i, (Yi - y[i])/sigma[i]);
}
return GSL_SUCCESS;
}
int
expb_df (const gsl_vector * x, void *data,
gsl_matrix * J)
{
size_t n = ((struct data *)data)->n;
double *sigma = ((struct data *) data)->sigma;
double A = gsl_vector_get (x, 0);
double lambda = gsl_vector_get (x, 1);
size_t i;
for (i = 0; i < n; i++)
{
/* Jacobian matrix J(i,j) = dfi / dxj, */
/* where fi = (Yi - yi)/sigma[i], */
/* Yi = A * exp(-lambda * i) + b */
/* and the xj are the parameters (A,lambda,b) */
double t = i;
double s = sigma[i];
double e = exp(-lambda * t);
gsl_matrix_set (J, i, 0, e/s);
gsl_matrix_set (J, i, 1, -t * A * e/s);
gsl_matrix_set (J, i, 2, 1/s);
}
return GSL_SUCCESS;
}
int
expb_fdf (const gsl_vector * x, void *data,
gsl_vector * f, gsl_matrix * J)
{
expb_f (x, data, f);
expb_df (x, data, J);
return GSL_SUCCESS;
}
The issue is that whenever I try to compile it I get the following error "alt.c:8:1: error: unknown type name ‘gsl_vector’ expb_f (const gsl_vector * x, void *data,"
I'm unsure of how to go about fixing this and would really appreciate any advice.
You need the include for the Gnu Scientific Library, xxx for the appropriate include.
#include <gsl/xxx.h>