I tried using the package poweRlaw to plot a few powerlaw fits. It seems working for a single curve. But I could not plot multiple plots on the same graph. Ref: Is there a way within this package? [P.S. I am a novice]
set.seed(1)
x1 <- ceiling(rlnorm(1000, 4))
x2 <- ceiling(rlnorm(1000, 2))
library(poweRlaw)
pl_d = pl_data$new(x1)
plot(pl_d)
#Now fit the powerlaw
m = displ$new(pl_d)
#Estimate the cut-off
#estimate_xmin(m)
aaa <- estimate_xmin(m)
aaa <- as.data.frame(aaa)
aaa <- aaa[2,1]
x_min <- min(table(x))
m$setXmin(aaa); m$mle()
#Plot the data and the PL line
#plot(m)
lines(m, col=2)
# next POWER LAW graph
#Plot the data
pl_d = pl_data$new(x2)
points(pl_d)
#Now fit the powerlaw
m = displ$new(pl_d)
#Estimate the cut-off
#estimate_xmin(m)
aaa <- estimate_xmin(m)
aaa <- as.data.frame(aaa)
aaa <- aaa[2,1]
x_min <- min(table(x))
m$setXmin(aaa); m$mle()
#Plot the data and the PL line
#points(m)
lines(m, col=3)
You can use the lines
commands to add multiple best fitting power-laws. So, using your data:
set.seed(1)
x1 = ceiling(rlnorm(1000, 4))
we load the package and create a discrete power-law object:
m = displ$new(x1)
Then plot the data
plot(m)
Next, we set xmin
and alpha
for each power-law and add it to the graph using lines
:
m$setXmin(100)
p_100 = estimate_pars(m)
m$setPars(p_100)
lines(m, col=2, lwd=2)
##Line 2
m$setXmin(202)
p_200 = estimate_pars(m)
m$setPars(p_200)
lines(m, col=3, lwd=2)
If you want to have multiple data sets on the same plot, the easiest way is to plot one data set, but save the data as a data frame. For example, generate some data sets:
set.seed(1)
x1 = ceiling(rlnorm(1000, 4))
x2 = ceiling(rlnorm(1000, 5))
Fit the power-laws
m1 = displ$new(x1)
m1$setXmin(estimate_xmin(m1))
m2 = displ$new(x2)
m2$setXmin(estimate_xmin(m2))
Plot data set 2, but save the data as pts2
pts2 = plot(m2)
Plot and add lines as normal:
plot(m1)
points(pts2$x, pts2$y, col=3)
lines(m1, col=2)
lines(m2, col=4)
to get: